Gene detail

Detailed information of ENSAPQP00000039902.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB4022467.1, phosphatidylinositol phosphatase PTPRQ-like [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAPQT00000044938

TGTAAGACAAGCACATTGCTCTAAATGACGCTGAATCAACTTTTTTCTACAAATTTTTCTATTCCAGTGCCATCCCGTGGTCCGACAAATCTTCGTACCGGCAACGGAACATCTCCAACGAGCATATTGCTAGAGTGGGATCCAGTCCCCCAAGACTGCGTGCACGGCATTCTGACAGGATATACCTTGCGCTATAAGGCAACTGAGCAAGGTGCTGGAATAAAGATAGAAGGTGGAGGATATACCACGATGAACGTCCCGCCGCATGTCACCATGATTGAAATCCCCAACTTGGAGTCCTACACACGATACAAGATTTCCATGTTTGCCAAAACCAAAGTCGGGAATGGCGTGTTTAGTGAGACCGTTGTTGGAGACACCTGCAGATGCTATGCGAAAATGTCTTCAAATTGGTGGAAAATAGGACCGTACATTGATTTGACGGAGGACTCGAAATTAACTGGAGTGTTCCCTTTTATATTACGTAATATGGTCGAGTCATGCTGTCAGTCTTGTCAGACGCACAAAACAACAACGGTGGAGTTTTTGACGGCGAGTAGTGTCCAGAAATCGCTTGAAGACGTACGCAGTGGCATAGGTAAGAATGATTTAAGCTTCCCGGTGTATGGTGCGACAGACCAGGACGTCTATGGTGTCTTCTATGGTTATGTACCAATCATCAGCTCACCAGGTGAAGCGTACGTGATCAATCGCGTACCCGACGAAACGTCAACGGACATACTGGTTGCGGTAATATTCAGCTGCTGGCCTATGGTTGTATTGAGTTTGGTGTTCTCGATACTGGCTGGTTTTCTCATATGGTTGCTGGAATTCAGAGCAAATCCAGAGCAGTTTCCTCCAAAGTTTTTCTTCGGTTTGTTTCATGGTGTGTGGTGGGCGTTCGTGACCGCATCGACTGTTGGCTACGGAGATCGCCGTCCCAAAACATTTGGAGGGAAGTTATTTGCTGTATTGTGGACATTAACCGGTCAAGTTGTCGTCCTTATTCTTACGAGTTTAGTCGCAGGACATTTGACAACATACTCCTTGAAGATTGACCGAAGCTTGTACGGAAAACGAGTCGCAGCCATTTCAAATTCATCTCAATACAATTTCGCAATTCGCCGTAATGCCAAAGTTGGAAGCACGGTGTGTCACAATGTAGAAGACCTGGTATCGGCCTTGAAAGATAGAAAAGTCGATGGTTTAGTTGTGGACACGTATGTAGCAGGTGCAAGGAAGGAATTGTTTAGCGAATATTTTCGCGTAAGGAAGGTGTTCGACCACAAGTCGGCGTATGGTGTTGTCTTGTCTGGGGACGCTATGAAATTACAAACATGCTTTACAAATTACATCAAGGAAAACCGTGCCATGGTCTCCGAGCAACTACGTAAATTTGTCGAAGCCATTGAGGAACCAAAGCTCAGCGAATCCGTTACACGTTCAACTAAATTATTTGACCCGACGTCGAGTCATGCTAATAAATCCATGCTTTACTCTACCGTTGCTCTGTGTGTCCTGATATTGGCCTCCTTACTTTATGAGGGAAATCGCCGGCGAAAAAAGAAGCATAAAGttGGATCGTTGAAGATATGCCAGGCAATGAAGGAATTACGCGAGGACATGAATCGTGAAATTGGGCAATTTTCAAGCAAACTCGGCCGTCTTTGTTCGAGAATTCGACGGAAACACAAGCAGGAGTTGCATCTCTTGAACGAAATGAAGAAATCCTACCTTTCAGACCAACGACAGAGAAACGAAACGGAGCTATCCGAAGTTAGAAATCAGGTGTTTGTTTACAACATCGAGTAAGGTAAGGGAGATTACTTTCTTAAGTAGTAACTACACATATAGCAATGATCAGTATCACGTAAGGTGATACACTGCAGAATTAACTATATTCAGCCTGACTGCGTAGTGGACGAATTtgcaaaatttcgaaaaagtaaaatttaagCACTCCGAACTCCGAAGTTAGTAATGTAGCAGTAGAATGTTGTAAAGTACaacacattcgaaatctgattttCCAAAATGATTTTCACTCTTATTTATGATGGCTTTTCTTACATGAAGTTTTTGGTATGGCGCGAGAAAGCAAGGGATGACGGTAAAAGGGGGATGCATAGGGATATGTTAGGCTGACGTCATCCATTCTTTCCGACGCCGTACTCAGAAACTTCATGTAAGAAAAGCCATCATcaataaaaaagaatgaaCGAGGAAGCCTTTGCAGAGGAGAGTGCATTTTCGACGTTGTCGGCCATGTTGCTAAGGAAATATCATGCACG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07885	Ion_trans_2	Ion channel	Family	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013099	Domain	Potassium channel domain	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11537	VOLTAGE-GATED POTASSIUM CHANNEL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005249	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0005251	Molecular Function	delayed rectifier potassium channel activity	Interproscan
GO:0008076	Cellular Component	voltage-gated potassium channel complex	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0071805	Biological Process	potassium ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04904	KCNH1, KV10.1; potassium voltage-gated channel Eag-related subfamily H member 1	-	Ion channels	ko04040	deepkoala