Gene detail

Detailed information of ENSAVKP00000002307.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_029181164.2, elongation factor G, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAVKT00000002616

CAGAGCCAGACGTTAACAGTTAATCGGCAAATGAAGCGTTACAGTGTACCCTGTATTGCCTTCATTAATAAACTTGACAGGATGGGAGCAAATCCAGCCCGTGTTCTAAGTCAAATCAGAGCAAAGTTGCAACACACTGCAGCCTTCACTCAGTTGCCAATTGGCTTGGAATCGGACGTGAAAGGTATCATAGATCTTGTCCGGTGGAAGGCCTATTATTTTGAAGGAGACCAAGGGTCACAAGTTGTGGAAGGTGTTATTCCTGAAGACATGGTTCATGAATGTACAAAAAGACGAcaagagctcatagAAACCGTTGCAGATGTTGATGAAGTTTTAGGGGAAATGTTCTTGGAAGAAATTCAGCCAACAGAGGAACAGCTAATTGCTGCCATTCGCCGTGCCACTATCAAAAGAAGTTTTACACCAGTGTTTGTAGGATCTGCCTTAAAAAATAAGGGAGTCCAGccGCTACTGGATGGTGTTGTGGACTTCTTGCCCGATCCCTCTGAGGTGAAAAATTTTGCTTTGGATGGTGACAAACCTGATGAAAAAGTTGAGCTAAGCAGTGAGAGAGGTTCCGCTCATCCATTTCTGGGTCTTGCTTTCAAGCTTGAGGCTGGTAGGTATGGTCAGCTGACTTACCTGAGAGTGTACCAAGGCTCGCTCAAGCGTGGGGCCTTCATTGTGAACACAAGGACGGGGAAACGTGTCAAGGTCCCTAGGATAGTCAGAATGCACTCCGAGACCATGGAgGAAGTACAAGAGGCCAATGCTGGTGATATATGTGCTCTTTTTGGAGTTGACTGCGCCTCTGGGGACACTTTCACCGTAGAGGGAGCGAAATTACTATCTATGgaGCCGATATTTGTTCCAGATCCGGTTATTTCTTTGGCCGTGGAGCCTAATAACAAGaatGACTTGGCACAGTTCTCAAAAGCCCTCAGTCGGTTTGCCCGAGAAGATCCAACATTTAGAGTGAGTTTCGACGACGAAAGCAAAGAGACTATTATTTCTGGTATGGGTGAGCTTCATCTTGACATCTACACAGAGAGAATGCGCACAGAGTATAATTGTCCGGTTATCGCTGGTAAACCAAAGGTCGCCTTCAGAGAGACAATAGGAAAGGAAGCCAGATTTGACTATCTTCATAAGAAGCAGAGTGGTGGAGCTGGTCAGTTTGGTCGTGTTATTGGCAGAATCGAGCCTATGCCAGAAGAGTCTCTCACAGAGAACCAGTTTGAGGACGCTACTATTGGGATGAATATCCCCAAGAACTTCATCCCTTCAATAGAAAAGgGTTTCCTCGAAATATGTGAACGCGGTCTAATGACAGGGCACAAGTTAGCTGGAATTCGTTTTGTTCTAGAAGATGGTGCCTCTCATGGTGTGGACTCAAGTGAAATTGCTTTCAAGCTAGCAGCCATTGGAGCCATGAGAGAAGCATTTCCTAAAGCCGCGCCGCTTATTTTGGAGCCCATCATGGCGGTAGAAGTTAATATTCCTCAGGAATTCCAAGGAGTGGTTATTGCTGGGCTTAACCGCAGACGCGGAGTGATCACGGGCACAGATGCAGCCGAGGGTTACGTCACAATCTATGCCGAGGTTCCATTGAATGACATGTTCGGATATTCGACCGATCTGCGCTCCCAAACTCAGGGTAAAGGAGAATTCGCTATGGAATACTGTAAATACATGGCCGCTTCACAACAAGTACAAGCCGAGCTCATGGAAAGATTTGACTTGGAGAGGCTCAAGAAAACAAAGTCAAGATAGTGAATGGTTCCTTCCAGGTTCAACGCGATCTTGTCTTCCTAATCCTCTAGGGGACTGGTACCAATGTTTCTGTGGTCGCGGAGTCCTGGTAAAGACAAAATCGAAGGATTATGGAAAAATGAATTCAAGTGcaatattttaaaagaaatatcgAGTATCAATTTTTAAAGAAAGCTGGAAATCCAAAGCTATATTTATTGCGGCCAAGTGTACAGATAGCTTCTAGTTCTGTGTAATGGAACATATCTCGCTGACACAGGATATGATTTGGATTGGAGACTTCACAAGCTTTGCTGAACTCCTCTCATGACATAGGAGTTGATTGCACGAGGAACAGAAATCAAGAAATCATGACCTTTGAATCCTCGCCATTACGTCCTTAAATAAGCGCCTACTTATAGGCTGACTAATTTAAAACAAGAAAGCTATACAGAAGTCTTAGTTATTTTAAATCACTCATTCCTCAATTCAGTTTCAGAAGTGCGCTTGCACTCGCGAAGGAATGCACTTTCAAACTTTTTGCTCAGTTCTCCTCAAGGTTGTCACGTTTTCTCTTTCGTTATATTTTATAGGTCCGACCTGTCTTCGTTTAACGCTTTTGCTTATATTGTCAGAttctcgttgactatctgctcgtagaaaactcgggctcgtagtctaattgttaaatgttatGTGGCCCAACACAGTTTTAGCGCGCGCTCTGGCTAATGCGTTTCAACGTGacaaggattgcaaaaaaataaacgtGGCTTCGATACAGCCATCaatttatttgctcaatgctCACTCTCTCTGAGGTACGTTCCATCATAATTGAACACAGTGTATCATTTGATGGTTTCAGTATTTTATTACAAAGgcatatgttagaaaaggtatt

Protein

Uniprot

Uniprot term	Description
A7RR04	Elongation factor G, mitochondrial OS=Nematostella vectensis OX=45351 GN=v1g236547 PE=3 SV=1
Q07803	Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2
Q8K0D5	Elongation factor G, mitochondrial OS=Mus musculus OX=10090 GN=Gfm1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03764	EFG_IV	Elongation factor G, domain IV	Domain	Interproscan
PF00679	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF03144	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF14492	EFG_III	Elongation Factor G, domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005517	Domain	Translation elongation factor EFG/EF2, domain IV	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000640	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR047872	Domain	Elongation factor G, domain IV	Interproscan
IPR004161	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR009022	Domain	Elongation factor G, domain III	Interproscan
IPR035647	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR041095	Domain	Elongation Factor G, domain II	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43636	ELONGATION FACTOR G, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0070125	Biological Process	mitochondrial translational elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02355	fusA, GFM, EFG; elongation factor G	-	Mitochondrial biogenesis	ko03029	deepkoala