Gene detail

Detailed information of ENSAVKP00000012239.1 in Catalaphyllia jardinei

Genomic Location: not available for this species
NR annotation: CAH3129566.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation CJARD · all data for this species · gene families

Sequence

CDS

Transcript

ENSAVKT00000013065

AAATATGCTGAAAATATCCAATTGAATAGACTGAAAGGCCTCAGGACTAACTCTCCGCCTCTTCAGGTCTAAGGCTACTGTTATTAACCTGCTTCACAGCTCTGAGATGTCCTAAAGATGTTTTTCGGGGGCTTTGAACACCAGTCTCTTCTCCCATAATCACTCTAAATTATCAGCGAGGCATGTGAGTatacaaccagtgacgtcactACGTTATTTTGGCTgcgccaagatggccgccaatttTAGGCTCAACCGGTCAACTTCGAACGGCTGAAAAAGTAGTTTTCGCTTACCGTATGCGAAAAACAGGTTGGCagtatttccaaGTTTTGAAAATGCCTAGACAAATGGCTATTCAGTGTTGGAGACAAAGGCTTACAGGCCATTCTCTTGGTCCACAGCAGAATGGACGCATGACAATGGAGCACCTGGAGGAAATACTGCAGAAGAGTCAAATCGAGTTCTCTGAAGCCGAAAGACAACTGGCGGAGGAAGATCTAAACGAGATGCAAGGAATAACAAATAACCTGACTCCTAGAGTGAACATGACAGTACGAAGACTCCGTCTGCTTGCTAATAAACTCGATGAAACGTGGACGGACGGCAAATTAGCACATGCTGCCGGAACTACTTTTGGCATAGCGGGAGGGCTTTTGACACTTGCTGGAGGAGTGGCGACATTCGTGACAGCGGGAGCTGCCACGCCCCTATTGGTATTAGGGATGGCTGTTGGAGGTGCTGGTTTCGTCACAAACGTGGCTGCAGGCCGCATAGAGGCTTCCATCGTCTCACAGGAAATTAAGAAAGCGGAAAAGGACTTGCAGCAGACTATAGAATACATAAACATCGCCAACGACACTATCCAGAAGTGGCAGGATGGGAAAGAGATAGGAAGGCTGTTGTGTATTTTCTACCGCGCTTTGCATACTCTGAAGAAAACCGATCCCGTCATAAAGATTCTCAAAAAGGTAATTTCTCATTCATTAACAGTCTCTTCCGAGCTGTTAAAAAACCTCAACGATTACGGGGTAGGAATGGGTTTTGCCAGCAAGTTAGCAGGACAGGCAGCTGCTGGGGCAGCCGATGATGTTATGGGAGCGGCTGTTAAAGCTGGGGCACAAGGAGCTGATGATGTAGTAGGAGCTGGTGTTAAAGCTGGCGCAAACGCAAGCAAAATTGCAGGTGGAGTGATTATCGGTGTCAGTGCTCTGTTCCTGGTGTGGGATACCGTCGATCTGTGCTTCACGATCAGAGATTTAATCGAAGAAAAGGGCTCGGAAGCGGGCAAGGAATTAAGAGAAAAAGCACGCCAACTTGAAAAAGAATGCTCTTTCAACTAGACGGAAAGTTCCATTAATCAACACTAAGGAACACTGCTGTAAGCCTTTAATTCAATTAAGACTGGGACCAGTATTGCTGTAGACTAAACATAACATAAGCAGTGAGTTTTAACCATGATTGAATTTATAAGAGAGAACATATGAAAGTTCATATagtttgaactgcagagaatgatatgaagatatgattgatcatcgcagtttaattttcacacacacacataacacacacacagacacacacatacacacacacacaactaaagcagttttgaaatagcctgaaaaaataatcaagccagaacgggattcgaacccatgacctctgcgataccgcaGATGCAGTGTTcacccaactgagctatcaagccaaatGATTATTTCAGAGCTGCAAGAGTTAAGAATACTTATAAGAAGAGAATTGTAGCAATCGTCGCATGTTTAGTTGATAAATGCTCGGCTGTGTGTAAATTAATTGGTATAATTTAATGGTAAGTGAATGAAATAGTTAATTGTATTAATTAACGGTGTAATATTACACACGTAAGAGAAATAAACTCGGGTGCGGGCTTCTTTTTTGAATTTGCCGTCTATTCTCATTGCCTATGAGTTTTCAGTTGGTTTAATCTGAGTAGATGTACAGTGGTTATTATGCATTAAATGATTTCATAACTGAAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002625 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05461 all species →	ApoL	Apolipoprotein L	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008405 all species →	Family	Apolipoprotein L	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14096 all species →	APOLIPOPROTEIN L	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0006869 all species →	Biological Process	lipid transport	Interproscan
GO:0008289 all species →	Molecular Function	lipid binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042157 all species →	Biological Process	lipoprotein metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14480	APOL; apolipoprotein L	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.