Gene detail

Detailed information of ENSAVKP00000012677.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_020629914.1, ras association domain-containing protein 2-like isoform X3 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAVKT00000013548

ACGTGAATAATAATTCCATCCCATCCTGATAGTGAATAAGTTGGAAAAAAAGTTCCTAACCCCTCCTTAGACAGTGGTATTTTGGTATGTTTCGGCGTGACGTCATTGGCAACTTCGCACCTTGCGCGCGAGCGAAGAATTTTTCGTCGCTCTTCGAGAGGTCAATTTGTTTGGCCTGCGAAACTGCGGTAAAACGTGATGACTGAATGTCATAAGTGCGGCAAACTAGTATATTTTGGTAAGTTGAAGCCTTTAAAAACGAAATCCCGCCAGTAGATTGCAAAATAATTCTTTTGTAGAATTACAGAAACGATAAACAACTTTTGCTCCATCCGAACGGCGctgaaCAAAGAAATTCTCTCGGTAAAGTATGGCATCCTGGTTGTTTACGATGTGAAGAATGCGGTAAAAGATTAAATCCGGGCCAACATTCTGAGCACAGAGGTATTCCGTACTGTAATATACCATGTTACAGTTTGTTATTTGGCCCAGGTGGATATGGCAGAGGCGGTACAGAATCATATCAATATTTTGCAGATGATAAGCTCACGCCAGCAGAACTAGATGCTATAAGAAATGAAATAATACCTAAGTTGAGGGAATATAATATATTCTTTGAACAGAGGAAAGCTCTGCAGTTAACCAGCAAGGAGGTTGGAGGCAGGCTTATTCTTGAAGGCGTTCTCAAGATATACTGGGGATTAAAAGTGCCTGTTACACTAGCAAGCCACAACCTTTCCTATTGGAGGAGACGCTCTCAAAAAGAGCAGAATGGTTATGCGAGAGTTTTAGCTGCTAAGAACAAAGATGGCATTAGACCAAGAACTAGCAGCTTGGAGAAGGTTCTTGCCAGGCGTCGTTCCTTACTAGTTAACAACAGAAATATTCCAGATGCAGGGGACCAGAGGACCATTCTGGATTTTACAGTTCAGtctCCTGAAGGGCGGACGACATTTATTCCTCCTTATGGCACCTCAACAAACCTCAGAGTCACAAGcagaacaaaaacaagagaaGTCATTAAAATGCTGATGACTAAATTCCAGATTACAGATGGTCCCCAAAAGTTCCACCTCTATGCTGTGTATGACAATGGCTCAATCAGACAGCTACGAAACGAAGAGTTCCCACTTTACTGTCGACTTCTCTTAGGACCCAGTGAGgAAGCAGCCAAGATATTTGTTATGGAAGCTGACGACAGCAACAATATTTCTCACGAGGTTGCACAGTATATTCACTTTGCCACACCTGTGTTGCAAGCCTTCTTGGATAAGTATcaagaggaggaggagaaggaagTGGAGAGAATAAAACAAAGcTATATGTTATATCGTCAGAAGTTGCAGGAGAGACTTGCAGAAATCTCCACTGCTGTATAACAAAACTTAACTGTCTGCTTAggaatttcatttttgttttatttttatgctattctaaattaaataatatatttatttatttgttcaaataaaattaaaccTAAAGGTAACTTAAGAAAAAATTGATGCTCTTTTAAGACTACAAGAAGCCCCTCTTTTGCATAGTACATCCTGTGTGACGGCAAAGTAATTTTTATCTCTGTCACAGTTTTCTTTTGCATCTGCCTAACTGACCAAGTGAAAGAGGTACTGAAGTCTTGTCTAGATGTTTTAGGCACTTTGCTAAGAGATCAAGTTCAAATGCGAACGAACAATTCTTTTTGTGAAAGAATGTACATAGCCTCTTGTATGTTAactatcaacatcagaaaatGTTGAACAAAAGACTTTTGTAGCATCAATCAATCAGTAAGGAGAAATAACAATTTGATCCTTGGACCGATCCTCGACAACCATTACTTTTAAGTCATAGGTTATGGAAAACgagaaaatgtacaaaaattcaACACTGGTGTATTTACAGCAAGGACTCTTGAGCCATGAACTCTTGAGATTTCTTGTACATATTTTGTGGTTTAAATCATGGAATGAAAGCTCTTAATATAAATACCCATACTAAATACCCTcgccaagggcgtagccaggggggtcttggggtgcctgtgaccccccctttgtaagccttttataagcaaacaacctaaaatattcaggtgacaaacTGGTGAGTACCCGCTGTATTACTCAGTGTGACCCGCCCTTTGAAAAAACCTGGCTATGCCCATGCTCGCTAATATAAAGCCTGTCTCTGTATGGTCTGTtacaaaaaatgtacaagaaaatGTCAAGTCTTCACTCTTTGATTGTCCACTGTTACTGAAATCAATCAATGAATgataatatatttatttaaagtTTATGAGGATTCTAAAAAGCATATTCACCAAATCCAAAGTATCATCGATTCTTACCGTTAACTGAATATTTAAGTGTTAGTTT

Protein

Uniprot

Uniprot term	Description
Q3B7D5	Ras association domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Rassf2 PE=2 SV=1
Q566C5	Ras association domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Rassf4 PE=2 SV=1
P50749	Ras association domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RASSF2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412	LIM	LIM domain	Domain	Interproscan
PF16517	Nore1-SARAH	Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain	Domain	Interproscan
PF00788	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR011524	Domain	SARAH domain	Interproscan
IPR000159	Domain	Ras-associating domain	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR033614	Family	Ras association domain-containing protein 1-6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22738	RASSF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09851	RASSF2_4; Ras association domain-containing protein 2/4	-	Hippo signaling pathway - multiple species	ko04392	deepkoala