Gene detail

Detailed information of ENSAVKP00000014190.1 in Catalaphyllia jardinei

Genomic Location: not available for this species
NR annotation: PFX30175.1, Retinol dehydrogenase 8 [Stylophora pistillata]
Species Catalaphyllia jardinei · all data for this species · gene families

Sequence

CDS

ENSAVKT00000015354

ATGGCTTCCCAAATCGTGCAGATCTCTGGTTGTTCTAGCGGGATAGGACTCGCTACGGCGGTGTTTCTCGCTAAAGATGCCGAGAGACGCTTCAAGGTTTATGCCACTATGAGAAATCTGGCGACGAAAGGACAACTGGAGGAGCAAGGAAGGGCCTGTCTTGGAGGCACATTGATTATCAAACAGATGGACGTGTGCAGTGATGAATCAGTCGAGAAAGCTGTAAAAGAAGTGCTGGATGCTGAGGGAAGGATTGATGTGTTGTTTAATAACGCCGGCATCTCTGTCTTCACCCCCCTGGAATGTGTTTCCGTGAAAACGGCCGAGGAAATATTTGACGTGAACTACTTTGGAGTCTATCGCTTGATCCAGGCTGTGCTCCCAGGAATGAAAGCGAGGCAGAGCGGGCTTATCATCAACAAcagcagccattttggaattGTTGGAATACCGTTTGTGGAAGTTTACTGTTCATCAAAGTTTGCCCTTGAAGGTCTGACCGAGAGTATAGCTCCGATACTTCGTCAGTTTAATATCAGCAAAGGGTTTGCAAAAATGTCCTGTTCTTGCAACGCCTCAGCGAAGAAATTGAGCAACTCCAAACCGTTTGAAGGTCCAGGCACATTTCTTCCACTCGATTTATGTTTTCAGGCTTTTTGCTACAATGGAAATTGCGTTCCGTCTGCAGATACTCAATGCCGAGACCTGTGGGGACCAGGAGCTTCCAACGCTCCCTCTGCCTGTTACGAAAAACTGAATGTTGAAGCCCAGGGGTTTGGTAGCTGTAGTCCACGCACAAATCTTCCATGTCGTGGTAGAGAAAATGCTAAATGCGGTCAGCTGCAGTGCTATTCAGCAACAAGAACGAGGCCCGTGGTGGACTATAGGAGTTATTACGAATTAAAAGTTTTACCTACAGGAGAGAAATGCAGCGCAGTGTCTCGTAAGGGAGGTAGTGGAAACGAACTTGTTGGCATGGTCAAAGATGGAATAGTCTGTGGAGTCAATAAGCATCGGCAAACGGAGGACGAGACTGTGATGGCGAAAGAATTCAAGAAGCATCatgtaacaacaaaaaatgtcCAGGTAAGCAACTGTAAtgttGTTCATTCGTGTCAACATCTCTTCACTCTGGGAAAAGAAACTGGTGTCCAGTTTCCGGATGGAGTGTACACTATCAATCCTGACGGAAAGGGCACGGTAAACACTTACTGCGACATGTCACGTGACGGTGGAGGGTGGACACTATTGGTCACGAGCCACACAAACACGTGGACGGCCAAGAGCGTAAGAAAGAGTAATGAGAATAAGCCAACTTTGAACGGAGATTTTTCCATTCTATACAAAGCGGATTTCATCAAGGACTGTCTCAGCGTGGGTGGAGATTGGTTTGAGTATCGAATAGAAGGCAACGAGCGAGGTCGTTGGGGTGGAATATGGCGTGCTCCAAGAGACTACTCGTTCGTGGCCACTAACAACAAGCAGACAAATTTCGAATTGATGAAAGCATTTTACAAGCGGAAATATTACGATTATGGAATCGAAAAGAGAAGGCCTTGGATATCCGGCGCTAAACTAACCACTTCAAGGAACGCAACTGGAGATCGCCAATGGGGAACCTTGATTGGTAAGGGTGCAAAGAACTTAGATCACCAACTCTTTCCTGCACCCTGGCTGGATGGTCCCGACGTTGAACAGATATTCAATGTGAGAACAAAACATTTGGACAAATTTATCGTAAAGTTCAGCATTGTTCCTTGGGACTTCGTTTCCCTTATAGATGGCGTCTACACTATCAAGCCTGGTAACCGTAAAAGTAAAACCTTTTGTAAATTCAATGAACATGGCGGCGGCTGGACGCTTGTGTTGACAAGCGCAACTGACAATGGATGGACAAGAGATAACGTGAAGTCGAGAAATACTGACAGTCCATCCTTGACTTCTGATTTTTCTATATTGGAAGTGGCTGACAAGATTACAAACATGACACATTTTCAGTATCGTATCGAGGAAGATGGCGCAAAATCTTGGGAAGGCCTCTGGACAGCTAAAGCTGGCTGCTCGCTCACTTCTGGTCGCTTATACAAGGCTTGCGTGGATTTAGTTTCTCAGAAGGGACGTTGGGATGATAGTAAAGTTATGTCCACAGGGAAACTACCTTATTTGGCCACTTCCGGTAATGCTGTTTTCACGAGCGCTGAAAATGAAGCAGACTTACGTGGTGCGATTGTGGTGGACGAGGGAACCTGGAGATCTTGTAATGAaatcaaagtaaaaaatcatGGAGGCAAGATATCATTGAAAGACGGACTTTACATGATTCGTAAGAACTCCCATGAGTACTTGCCGGTGTACTGTGATATGACGTCAGAGCAAGGAGCATACACGCTGTTAGTTACCAGTGGTTCTAACGGTTGGAAAAAGAACGAGGTCTTCTTCAGTCGGCATTTTGatgtgcgcagtgaccaaagtagcagatgcttccgagttggccactgccacgttgagctaactggcgtagacaaaaagcgtgatgaaaatagattttacccagagtaa

Transcript

ENSAVKT00000015354

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P14061	17-beta-hydroxysteroid dehydrogenase type 1 OS=Homo sapiens OX=9606 GN=HSD17B1 PE=1 SV=3
Q1WNP0	Estradiol 17-beta-dehydrogenase 1 OS=Pan troglodytes OX=9598 GN=HSD17B1 PE=3 SV=3
P51657	Estradiol 17-beta-dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Hsd17b1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000540 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08516 all species →	ADAM_CR	ADAM cysteine-rich	Family	Interproscan
PF00106 all species →	adh_short	short chain dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006586 all species →	Domain	ADAM, cysteine-rich domain	Interproscan
IPR002347 all species →	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR014716 all species →	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR020904 all species →	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43391 all species →	RETINOL DEHYDROGENASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAVKP00000014190.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.