Detailed information of ENSAVKP00000014696.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: PFX19612.1, LIM domain-binding protein 2 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9W676LIM domain-binding protein 2 OS=Gallus gallus OX=9031 GN=LDB2 PE=2 SV=1
O43679LIM domain-binding protein 2 OS=Homo sapiens OX=9606 GN=LDB2 PE=1 SV=1
O55203LIM domain-binding protein 2 OS=Mus musculus OX=10090 GN=Ldb2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17916LIDLIM interaction domain (LID)DomainInterproscan
PF01803LIM_bindLIM-domain binding proteinFamilyInterproscan
PF21031WDR54WDR54RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041363DomainLIM interaction domainInterproscan
IPR029005FamilyLIM-domain binding protein/SEUSSInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR049546RepeatWD repeat-containing protein 54-like beta-propellerInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10378LIM DOMAIN-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0030274Molecular FunctionLIM domain bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24143LDB2; LIM domain-binding protein 2-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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