Gene detail

Detailed information of ENSAVKP00000015595.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_022804777.1, uncharacterized protein LOC111341999 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAVKT00000016888

AGATGtaccatgtacatgtattcaaACGTTTTGTTTTTAGTGAGTCATGTAAGGTTGTTGTCAAACGTCATAAGCATTCTTGAGCCACACTTGAAAGAACTTGTGAAGCAGCATGGTGAGATCAGTGACAGATTATCAGTTAGTGAGGGCAATATTCCATCTGCAAGTGAACACAAGACGTTATCCAAACAGCTTGCTAAGCTGTCGCCCATTGTTCAGCTGACAAATACATTGGAGACAAAGAAAAAGGAAATCAAAGAGTTAGATGGGTTAATATCAGAGATTGGAGGAGAACTGGGTAAATTTGCTGAAGAGGAAAAGTCACAAGCCCTCAGTGAAATAAAGGAGCTTCAGgatgaGTTGCTCAGAGCTCTGGTGCCCCAAGATGATGCTGATGAAAACAATGCAATTCTGGAGTTAAGGGCAgGTACTGGTGGAAAAGAAGCATCTCTCTTTACTCAGAAAATGCTTATTATGTATCAAAGGTTTGCAGCATACAAGAACTGGAATTTTGAAGTTGTAAATATCAGTAAAAGTGAGAGTGGTGGAATAAAGGCAGTCCCCTACTCCACTGTTGCCCACCTCCCACGAACGAGGACGTTAGAGGTTGGTCTTTGGGAGGAAGCCTCTGTGAGTCTTGTTGGTAGTGGTGTGTTTGGTATGATGAAGtttGAAACTGGTGTTCACAGAGTGCAAAGAGTTCCATTGACTGAGACAATGGGTCGTGTTCACACTAGTACAATGACTGTGGCAGTGTTACCGCAACCCACAGAGGTAGATGTAGTTATCAGACCGGACGATCTTAGAATTGACACGTTCAGATCTTCAGGTGCTGGTGGTCAGCATGTTAATAAAACTGACAGTGCAGTGCGGATAACACATTTGCCGACAGGCTTGGTTGTGGGCTGCCAAGAGGACAGGTCCCAGATTAAGAATAGGAGCAAAGCCTTGCAAGTATTACGTACACGACTGTATGATATGCAGCGACAGCAGGCCGACTCAGAGAGAACAGAAGCCCGCAGGAAACAGaTTGGAAGTGGAGAACGCTCGGAGAAGATCAGGACTTACAACTTTCCACAGGGCCGCGTAACTGATCACAGAATAGGCTTGACCGACCACGGCCTGGAACTTTTCCTTGAAGGAGAAGACAAGCTACATGACATGATCCGGGCTCTGCAGTCTCAACATGAAGCTGAGGCTCTACAGCAGCTGACCAGTCAATACAGCAGTGGAAATAAACAGAAAAGCTAGCACGAAGCAAAATGGGACTGAAACAACATCAAAAATAGTTGAGACATACAGGTTGTTGTGCCGACCAAGGAGGTGCGAAATTAAGCTTTAGCAGGTTGCATGAATTATTAGGCGGCATTTTACCGTCTTGCAGAAGAGAGAACACTCGCATTTCTATGTCAACATCACAAATTCCCAGACGCTAAATTGCAAAGTTGCAGCAAAggttaaaggggcattgtcacgctgtttggcaactttataaaaagctagaaggtgtcttttcatcaattgaatttcaaaactaatgatctagttttgttattaaagactattaaaggtactgaaactgtttcctgccgcctgtcgctacggatggcaagggtggaaatggattgaaacttgaaaaaaatggccaatttttcGAGTTTTCATGCTACGTgatccaaaaatcctcaagaaatttattgtgCTCAGCCctttctgataaaattcatttcatttcttcgtcgtagctttacagaagcattttgtttgtgATGAAAGCTTCAAAGTAAttattttagcacagaattgacctaaaacagcaaaatcctctgtgacactgctcctttaatgttttttttttttcacttgctcATAGTTTTCTATCTCGAACCCAGAATTCCCACGACCAGTGTCAAACAGAGTGAGATCTGGTACAAGATTACAAAATTTTagagggacacagtcagctggcgcacatgcgtattaagatatgataaaaatgatatcataggatgagcaaaaagACACTCAAATACAGGTTCTTCAGGAAAGGATTTCTAGATTAACTTTGGGCAGGTTGGGCTGAGCTTTTCCCAAAGTGACCAAACTAGCGTCCAGGTCAACTCGGTCCCAAAGCTGAGTGTGTCCCTATAAGATCGAAGGATTCctcaaaataaagattttctGCAGAAAAATAGGCCTAAACATTATCAGCCTGAGCGAGTCCTAGTTTAAGGTTGGAAAGTCGCCGAG

Protein

Uniprot

Uniprot term	Description
Q2K3T1	Peptide chain release factor 1 OS=Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42) OX=347834 GN=prfA PE=3 SV=2
B5ZRR4	Peptide chain release factor 1 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) OX=395492 GN=prfA PE=3 SV=1
Q92MK5	Peptide chain release factor 1 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=prfA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00472	RF-1	RF-1 domain	Family	Interproscan
PF03462	PCRF	PCRF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050057	Family	Prokaryotic/Mitochondrial Release Factor	Interproscan
IPR000352	Domain	Peptide chain release factor class I	Interproscan
IPR004373	Family	Peptide chain release factor 1	Interproscan
IPR005139	Domain	Peptide chain release factor	Interproscan
IPR045853	Homologous_superfamily	Peptide chain release factor class I superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43804	LD18447P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003747	Molecular Function	translation release factor activity	Interproscan
GO:0006415	Biological Process	translational termination	Interproscan
GO:0016149	Molecular Function	translation release factor activity, codon specific	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02835	prfA, MTRF1, MRF1; peptide chain release factor 1	-	Translation factors	ko03012	deepkoala