Gene detail

Detailed information of ENSAVKP00000017626.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_020617925.1, uncharacterized protein LOC110055856 isoform X3 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAVKT00000018971

GAAGCTGTGTCTGACCTGACTGAATTGGAGGAACTGGACTTGCCAGATAATTATCTGGAAGAATTACCAACAAGTATTAACAAGCTGAAAAATCTGAAGAGGCTGACATCAGAGGTGAACCAGTTGAGAGAACTTCCTCAAGCCATTGCTGAGTTGAGTAACCTGACCATGCTTAGTGTGAATAACGAGTTGTCTGTTCTACCTTCAAACATTAAACATCTCAAGAATCTCCAGAGACTGTACTCGAGTAGAAACCAGTTGACTTCATTGCCTGATGAGATTGGTGAACTGAAGGAGCTGGAATATAATTATCTGAAAGAATTACCAACAAATATTAACAAGCTGAAAAATCTGAAATGGCTGTTGTTAAACAGGAACCAGTTGAGAGAACTTCCTCACAGTATTTGTGAGTTGAGTAACCTGACCTGGCTTAGTGTGGATAACAACCAGTTGTCAGTTCTACCTTCAAACATTAAACATCTCAAGAATCTCCGGGCACTGAACTTGAGGAATAACCAATTGACTACATTGCCTGATGAGATTGGAATGAGAAAGGTTGTGAAGCTACAGAATAAGATGAAGTTTGACACAGATGTGTCAAATTCCATTCCTCaagaagaagaaagacaaagagCACAACTGGCTTATGAAAAGGCTCTAATTGACGGCTCTGTGAATGTTTATCGTGGTCGCATATTACTAATTGGTCAGGATCGTGCTGGTAAAACCAGTCTAAAGAAGAGTCTCTTAGGCCTGCCATTTGACCCTGAAGAACAGAGTACTGAGGGAATTGAAGTACAGGCTTCAACATGTGAAATAGAAGTTGAACGAGTTAAGAACTGGCATTCCACCAATGAGAAACCAGGTTTGCAAGAATATTCTAGAGATATATCAAGGATAGTGGCAGAAAAACTGAGTGATGAGCCAACAGAATTAGAGAGTGGACATTCTACAGCAGCTACAGAAGCAACTGTTGAGGAGAATGAGCCTGAGGTAATAGTCAACACCATTTCACCTCCTGATTATGTCACACAACATGTTCATCAGTTTCTGAAGTATGCTGGAGGTGAACATGCTGAAAGTGATCTCACTAAAGAAAAATCTGTTGCCAGTTTGGACGTGTGGGACTTTGCTGGACAGCATCTGTACTACGCTTCTCACCCTCTTTTCTTATCATCACATGCACTGTACATTTTAGTGCACAACCTCAGCAAGCCATTGCATGCCCCAGCTAAACCCTGTGTTAGACAAGGAAGTCATAATATTGCTTTGGAAAACccaaacaatgaaacaaatcTGGAGAATTTGCTATCCTGGCTTGCTACAATTCACAGCATTACACAAGTGAAAGAAGAACCCGATATTGGTGCTCAAAGTAAGCTGGCCTATTTGCGACCTCCAGTACTCATTGTCGGCACACATGCTGACAAACCATTTGAAGACATTACAGTGATGAAGTCACAAATAGAGAAGGCAATTTCTGGTAGGGAGTATGGGGAACATGTGGTCCCACCATTGTTCAGTATTGATAACACAAAGCAAAAGAAGAACACCAGTGACATTCAAGATCTGAGGGACAAAATCATGGAGGTGTTGGAACAAGAGCCATATATGGGGGAGAAAATACCTGTTAGGTGGTTTCTGTTTGAAAAGGTGATTGAAGCTTTGATAGCGCAACAAATTTATCATAGACATATAGAGCAACTCCAAAACTATGCAGAAAAACATTGCTTCATAGAAGATGCAGATGAGTTTGCTGGCATGATCAGTTTCTACCATGGTCTTGGTATGATTATCAAGCATCGCAGTACAGTTGTTCTGAAGGCTCAGTGGCTGATTGACCTGTTAAAGCAGCTGATAACTATTCCACCCTTTGATAAAAAGCTTGTGTCGCAAACCATTCGTTGGTGTTGTAAGGAGACTTGGCCCATTGAGCAGCCCAAGTTGTACCAAAATGGAGCTTGTTTCTTTATTGGGAAACAACTCCATCATTTCATTCTCATTTGCAAGAAGAATTTTGTGAAGATTGTTCTAAGGAATTTAGAAGCACAAAGTCATCAGGGTTCAGAAGAAAAGTCAGAAGAACTACCTACACAAGTGCGCGAATTTGTTGAAGGAACTTTGCAAATCTTGTCACATGACCTTCCATACCTGAGTGGACTGCAGTATGAGTTGTGTGTAGCCTGCCCATACTGTCATCACAGGAGAGATGAGGGTATTCAGGAGTGTTCTATCCATGGAAGAGTGTCATGTGTTGACGAGGAGTGCTTCCACCTTCTTGAAGTTAAACAGGATCAACCACTGATCTGTAAGAAGAGGTTCTGGGACAAAGTACGCACTGTCCATGGCCTGAAGGAATGGTTCTTAAAGAGAACAAGCCAGAGATTTTCCAAACTTTCACTAGTGTTtctatataactcgatagaaacatggagagGTTGTTTTatacaagtatttcttttagaaaacactgtgatgaataaagggaaacaacttctttactttgatcatcaaaatgtaaattctctttgctcatgccatcatttcatcaacagcttgtgcaaattctgtgtttctatcgagttttag

Transcript

ENSAVKT00000018971

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00560	LRR_1	Leucine Rich Repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan