Gene detail

Detailed information of ENSAVKP00000020085.1 in Catalaphyllia jardinei

Genomic Location: not available for this species
NR annotation: XP_020614150.1, UPF0668 protein C10orf76 homolog [Orbicella faveolata]
Species abbreviation CJARD · all data for this species · gene families

Sequence

CDS

Transcript

ENSAVKT00000021630

GAAATTTTTGCTTGAAATATGGCTTCAATGCTCTTGCCTATAGATTTGTTTATTTACTAGGAACATACTGATGCATTTGAAgttgatttttttgtctttggtaTGAAACTGGAGTCGATATGATTTGAAATACTTGAGGAAGAACTCAGTGAGATAATTTGGCCAAACTTTTTGCTAATTGCTTCGTGTTCAAGTGTAAATGCAATGGTTCATGCTATGGCTGAAACAAAATCGGGACCATTGTCACCAAAGAAGCCGGTGAAAGAGAAAATCGTGGCAATCTACGATGATTTTTTTAAGGGAGATGATCCATCGCATGAAAGTCCAAATTTCTGGCATGAATTCTTTCTCCTGAGGGTCAATGCTGTTTACCTGGAAAAGGGTATTGATAAACTCAGGGAAGAGGACCTTATGGACATAAAGGAGAACATAAACCTTCTATTTGCTCAGTGCTGTATTGCATTGCGAGGAGATCACCAAATAAAACTTGTCAATGCACTACAGGGATTGTTAGAGAGTTTGCACACATTTCTAGTGGGGGACTATCCAGTGAGCTTAAAGAACTTGTCACTTAAGCTGGCTCTGATACTTGTTACAGCAACAGACAACGTCAGTCAGAACACAATAGTGGAGTATATTATGATTAACAGCATTTTTGAAGCAGTTATCCAGGTCCTTGCTGATCCAGTAGCCAGACAGCAACATGGCTATGAGGCAATGCTGCTCTTGACAGTGCTTGTGAATTACAGGAAGTATGAGGCTTCAAATCCTTACATTGGAAAGCTGTCAATCTTGGATGATGAACTGGCTCTAAATGGTTTTGGGTGTGTCATATCAGCTGCACTTACCGATTACAACAGGAAACATGCAGCTATGTTGGAACATGCATCTGGAGGATTGATCAGTTCCATAACAAGCTTTGTTGGAAGCATGTTTGTTGCTGAGACGGAGAGATCTGAATGTTTCAGTACCAATGAAGCTGTCCTCTTGGCATTATATGAAGCAGTCCACCTTAACAGAAATTTTTTCACTGTCCTTAGCCATGTCACGACTGCTCCAGGGTCCAGTCCCCCTCCGTCACCTACTGCTGCCCCTCCTGTTGTTGAAAGGACTGCAACTGCTGCCGTTGTTGAAGATTTTCCTCCAGACTTGAGCCAACCGACCAATCTACTTGTCACTCTTTTGACATACTCTTCCATTGCTGTACAGAATACAAAAGACGACAAGGGTATAAGCAATGCCAAGCTGTGTCTGATCATTTTAACTTGCATTGTTGAGGATCAATACGCCAATGTTTTTCTTCATGATGCAAACATGACGTTCTCAGTCCCTTTACATAGAGTGCAAATGTATCACAGAGGCGCCGTTATTGAAAAGAATGCTCCCTCGCGACCTCTCGCTTGCGCATTACTTGATCTTATGGTGGAGTTTATTGTGACTCACATGATGAAAACCTTGCCAACCGACTTATACAGtaAAACGTTTGGAATTCTGCACCGTATGCTTTGTTACCAGAAGAGATGTCGGGTCAGGCTGTCTTATTCTTGGAAGAACTTCTGGACGGCTCTAATGAACTTCCTTAAATTCCTTCTCTCCAATGAAACAGCGCTCACAAAGACCTCTGATATATTCTCTCTGGCCTCACAGgtGGTTAATATCTTCAATTTGTTTATCACGTATGGTGACACATTTCTGCCGTCTCCCACGTCATATGATGAGCTTTACTACGAAATCATACGCGTTCATCAGATTTTTGACAACCTCTATTCAATGGCATTGAGACATTCAACGAATGGAGGTGACTGGAAAGATCCTGCATCCCGTCTTGCCAGCTCTTTAGTGAATGTCAGGTGAGTTTGTCAAAAGAATTATTCAAGAATTCTCAAAACGAATTCCAATGTTATCTAAATATATTGTTCTGCAACGGACCCAATGAGTTCTTGAGCAGTTTTCTCTTGAGTGTATGACGTAACTCGCTTTGACTTTGTTTGACATTACTACGGTAAGCGATTGGCTGTAAACATCGTGACagtttttcatccaatcagaataG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DCT2	Armadillo-like helical domain-containing protein 3 OS=Xenopus laevis OX=8355 GN=armh3 PE=2 SV=2
Q6PGW3	Armadillo-like helical domain-containing protein 3 OS=Danio rerio OX=7955 GN=armh3 PE=2 SV=2
Q5T2E6	Armadillo-like helical domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ARMH3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005711 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08427 all species →	ARMH3_C	Armadillo-like helical domain-containing protein 3, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013636 all species →	Domain	Armadillo-like helical domain-containing protein 3, C-terminal	Interproscan
IPR039868 all species →	Family	Armadillo-like helical domain-containing protein 3-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13608 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23951	DYM; dymeclin	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.