Gene detail

Detailed information of ENSAVKP00000021635.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_020618984.1, rab GTPase-activating protein 1-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAVKT00000023288

TCGACTGTGAACGCACCTGTCagtgaaattgaattgaaaagaACAATGTCTATCCTGCGAGAACAGACAGAAGTCACTATTGATGTTTTACTCTATGTTGGTTCCACATCAGAGAGCATGATCAGACTTAAGGAACCTGGATCGCAGGCTGACATTGCAACTTACCGCATACAgagaattttgttttgtggtcgTGGTGATGCCGAAGGGAAAGAAAGAGACTGTTTTGCCTTCAATACTGTCCATGGAGACTCAGATATCTTCCACTGCCATGTATTCAAGTGTGAAGATCCAGAAAAGgctGGAAAGATCTTGAAGACATTTGCGTTATCATTTAGAAGACACAGGAAGagGAAACAGCAGTTACAGCAGTCATCTGCTGACACTTCTACAATGGTCACTGGTATTAGCAACCTTGTCTTCAAATTTGATGTGACTCTGGACATTCTTGAGGAAGACAACAAAGGATTTTCCTCTGCGGCTAGGgacaaaaactgttttaaactTCGACAAGATTTGAGAAAGAAAGTTTTAATAATGGTGCAACAGTTGACAAACAAGCATCTTATTGTGGAAAGGTGTTTTGGACTCCTGATCTGTCCTGGGAAGAATGTTCGGTATTCTGACATGCACCTATTGAGTGAGgtgtCAATGGAAGTTGCAGATGGCGGCAAAACCTATTACATTAGTGGGTTATGGAATCCAGCTGTGCGTGACTTGTTAGTTTTAAACACAGAAACTCCAAAAGATTCACGAATATTTGTGACAATAGCTGTGGACTTAGTTGTCACTGGAGTAACAGAGCCGGTGAGGTTCATTGTGGAGACAAAAGCTAAAATTTTCCCCAGTGGAGAGAAATTCTTCTGGAGTCCCAGTAAACCAAAATTCCATGAAACATTTATCATGGAACTGAAAGAGGTTATTGACACTGAGACAGGACAGAAAAGCTGTGAAGTGAAGAGCATCAAAACTGAACTCAGTATAGAAGCTTCTAAGAATATGTCTAAGAGGCAACCCAACCTGACAAGACAGCTGTCTGGAGGGAACAAGACTTCTGATGatgatgatgaagatgatgaacCACTGCTGTCAGGATCAGGTGATGTGCAGAAAGAGTGCACAGAGGAGGAGCTGGGAAGCTGGGCAGAACTGTTGAATAAATGGAAGGATGTCACTCTTAGGCCAAGACAACTCCCTGGACTTGTAAGAAAGGGCATACCTGATCCTCTCCGAGGACAAGTCTGGCAGATGATGGCTGGTCTGAAAGAAAATGATGAACTTCTTGAGGGCTACAAGCATTTCATTAAGAAGgattgAGCCCGCCGcaaagaaaagaagacaaagaatgcctgatcgcaggttagcaagaagaaaacttcagctcaaatgtaagttttgctttgtatttcagcgttcctttgctgataaagtttccgtttcatgcgctttttttttcagcatgagcagcgtgttagcttaaggcttcctttttctgtgttgtcagaattaaccATTTCatagaacaagcagttttgtaccggccaaaaaaatactttcaccttgaaaaattttataaatcactgatgtTGATTTGATTTAGATATCGATTTgtgcaatagatttcctaagtcgagattgttttccttggcctaacactgcgctaaACCTAAcatgtcctgaccttaactttaacctaatccgaagtgttaacccctaaccttgttccgtaaacctaaccttcaatgctaaccctagttttgagcgGTAACCCTTAccccaactctaataaaactgggaactcttaccCTTAGGAGTAtatacgcaacagaaacgaggggtaacaagtgcaaggcagttttctacaggtataaacaaatcagcatgcaaagtttggagctgttttggccattttcgattttagcaaaaaatttaggggacgttcttgcctgTGACACAGTGAAACAAAGATAGAAGTGTTGTAACAAAAAGACGAgagaaaaaacaattattttgagataagtTGCATTTCAACAGTGTTAAATTAGTGTCCATTTAGCTCTTATCTCAGGAGTTCTATAGTagctgaataattttttttgaacgaagcgaatatACTGTGGAGTTCTCTGTAAATTAAGTCAGTGCAGAAATCCAGCCTGCAGGCATACTGtttacttttaaaacctaaaactccccccaaaaaaggcaactaaatgaaagaaatgtgacATGtatttcaataacaataaattttcattcaagaaaatgttcaaaatctCACAGACGTGCTTTGCTGGATGACTGAATGTAT

Protein

Uniprot

Uniprot term	Description
Q9Y3P9	Rab GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=RABGAP1 PE=1 SV=3
Q5RAN1	Rab GTPase-activating protein 1 OS=Pongo abelii OX=9601 GN=RABGAP1 PE=2 SV=1
A2AWA9	Rab GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rabgap1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00640	PID	Phosphotyrosine interaction domain (PTB/PID)	Domain	Interproscan
PF12473	DUF3694	Kinesin protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006020	Domain	PTB/PI domain	Interproscan
IPR050302	Family	Rab GTPase-activating TBC domain-containing protein	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR022164	Domain	Kinesin-like	Interproscan
IPR000195	Domain	Rab-GAP-TBC domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47219	RAB GTPASE-ACTIVATING PROTEIN 1-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-