Gene detail

Detailed information of ENSAVKP00000023195.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_020626809.1, schlafen family member 13-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAVKT00000025027

ATGGCTTTGGTCATGCCACCAACAATAAGAGCTTGCTCGCCGGCTAGAACCTCGGACAATGTTGAtCGGAGTAATGTAGATATTTCTCATCTTGATAGGCCTTTTGCTGAGAATGTACTTGAATACCAAATAGAGGATCTAAGGAATAAAGGAAGCAACGTAATGGAAATTGTTGAGTACTGTTGTGCTCTTCTCAATGGTGGTGGAGGAGTACTTGAAATGCCAATTGCCAACTTTAAAACGTTGAAGACTCCTCTCAGTGACCTCGATACATTTTGGAAAAGGGTAGAACCCAATCTGAAGAAACTGATTGAGCCACAATCTTATGCTGAGGTCTTTGATCGTGAATATGATGGCATTTCTGGTAAAGTCCTCCTATTTATAAAAAGAAAGCCAAATCACTTTTACACATGGAAATCCCATTTGTTCCTTGTTGGTGATTCAGAGACCTGTGAGGCCTCATACACTCAGGTGAAAAGTGTAGTGACTAAAAAGTCTCCAAATCGTGAAGACACTCTCTCCAATCTTCCAAAGTTAAATGACGAATTTGTCAGTGATCAGAGAGTTGGTTTCCACGAGGGTAAACAGATCCAGCTCAAGCACTATGAATCTCAAaaaattttggatactcacAGTAATCACAAGCAGTGTGATAGAATAAAAAGAGCAATATCATCCTTTGCTAATGGAAGTGGCGGTATTGTTGTTCTGAGCATCACAGATGATTGTGTAGCAAAAGGCCAAAGTTTGGAAGGAGATTCCAAGGAGGCCATCGTGGGAAGGGTAAACACCTTAATCAGCAACATGGAATGGCCGCCAAGTGTTGAGCCAGCACAAGGAAAACACTGGGATGTGAAGTTCTATCCCTTAAGGGGTAAAGCAAACTATTTTGTCATAATGATCTATGTGGTTAGAGTGTCTGGGGGCGTTTTTGCCAAATGCCCTGAGAGCTTTGAGTTGCGTGCCTCCGAAGATAGCACTGGGGGACAAGTTCATCGCCTAAGTTTTAATGAATGGTATGACCGAATGGTTGATGGGACAGACTTTCAAGATAGCAAAGTGAAAGACGACTGCCCCATGCTCCCAAAAGCTGCCTTATCGAAGCTTCCATCAACTGCAAAAGCCCTTATACAACAAATACAAGGGATTGTGAAGACGGGTGGTAGTGGAGGACTCCTCCTATTCTCCTGTTCGTGGCTAAGGAATGTTGGTCCTGGAGTTCGCCCAAATGGTCCTGGAGCACGTCCCAGTGGCCTAATATGTGACCTGCTGCTCGCCATGCCAGCCAAGGCATGGGAGGAAAAGAGCATCACAGGTTATAGCCAAACAACTGCTAGAGATCTGAAGAAATTCCTTGAGTCTGAGGGGGGCTGTGATGAAAAATTCTACATTTCTAAGCATGTAGTTTCTTGCAGTGTGAAAACAAGTCTTGGTGGTCTTGGTGCTGACAGCCGCTACCCAGCAGTGTATGACATGGAACATACCCCCGAGAAGCTTAACAAGATTCTCGATGCCCTAGTGATCGTTCTGGCTAAGGTCCCATCGACCTTATCTAGCGCCCTGGGAGTCACCATTATGAATCTCTTCACCCCACTGCAGTTCCAGCTGGTACACGAGGAGATTGATGAGCGTGATAGCAGAGAGCTCTGGATCAAGGGTCCAGCAGGATCTGGGAAGACTCTGGTAGCTATTGAGTTCATCAGAGAGCTTTGCCGCCGTGATGAGCACCTTAGAAAAGACAACATCCTCTACGTGTGTGAAAATAAAGGGCTCAGAGAGCAAGTAAGGAGGGCTGACGTATGTCAATGTGTATGCCGTAAGACCTTCATGACTGACAGTTTTTCTGGGGTCAAGCACGTGGTCATGGACGAAGTCCAGAATTTTAGAGCCGAGGACGGGGACTGGTTAGGGGAAGCTAGAAGCCTGGTTCGTTCAGGTGGCCGTGCAAATGATCCAGGGTATTTGTGGCTGTTCATTGACAACAGTCAATTAAATCACTCTTTTGAACACGGCATCCCAAGTCAACAAGTACCCAATTTTCGGCTTAAAAAAGTAATCCGAAATTCTAAAAGAATATTTGATTTTTCCATGAAATATATATCTAACGAGGCTAAAAGTAAAATTGAATTGGGCCACGATTTTAGTGGAGACAAGGTGAAAGTTGAAAACTACTCAGAGGGAAATTCTCAGCTTAGTTGTCTAAAGCGAGTTTTGACAAATTTGTTCAGTGGAGGGTTTAGTGAAGGAAATATTGCTGTCTTGTATGGGAAAGGAGATTGTATCCCTAGTGATCTTTCCATAAAGTTAGATCTTACAACTGTCACTGCCGAGGAAAACAGTTCTAACCATCTTGTTGTAAGTACTTTTCGTATGTACAATGGGTTAGAAAGACCAGTCGTCGTGTTGGTCGATCTAATGAGGTCACTTCCACATGGAAGTGATCTATATAGTTCCATGTATTGTGCTGTTACAAGAGCCATGGTTAAACTTGTGGTCATAGAACAAAAATCAAAAGTTTGCGACAGTGTGTTTTGCTTACCAAGTAGAATTAAACGCCGATTGTTAAAAATTAAACGGCTTACAGTATTTTTTTGCTACTTCTGTTGCGTATTTTGTCAATTGCTTCAGCTGTACTTCACAAAATTCGGCAAACGTGCGGCATTCCAAAACCCGCCTAACATTTCCGAACTGAACGCAATACGCAAAAATCACAACTAA

Transcript

ENSAVKT00000025027

Protein

Uniprot

Uniprot term	Description
Q5U311	Schlafen family member 13 OS=Rattus norvegicus OX=10116 GN=Slfn13 PE=1 SV=1
B1ARD6	Schlafen family member 9 OS=Mus musculus OX=10090 GN=Slfn9 PE=2 SV=1
B1ARD8	Schlafen family member 8 OS=Mus musculus OX=10090 GN=Slfn8 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04851	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006935	Domain	Helicase/UvrB, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24459	SLFN13; schlafen family member 13	EC:3.1.-.-	Transfer RNA biogenesis	ko03016	deepkoala