Detailed information of ENSAVKP00000024827.1 in Catalaphyllia jardinei

Genomic Location: not available for this species
NR annotation: XP_020617159.1, F-box only protein 42-like [Orbicella faveolata]
Species Catalaphyllia jardinei · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9D968Host cell factor 2 OS=Mus musculus OX=10090 GN=Hcfc2 PE=1 SV=2
Q5RKG2Host cell factor 2 OS=Rattus norvegicus OX=10116 GN=Hcfc2 PE=2 SV=1
Q9Y5Z7Host cell factor 2 OS=Homo sapiens OX=9606 GN=HCFC2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006390 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13964
all species →
Kelch_6Kelch motifRepeatInterproscan
PF13415
all species →
Kelch_3Galactose oxidase, central domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052821
all species →
FamilyF-box only substrate-recognition componentInterproscan
IPR015915
all species →
Homologous_superfamilyKelch-type beta propellerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46432
all species →
F-BOX ONLY PROTEIN 42Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019005
all species →
Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:1990756
all species →
Molecular Functionubiquitin-like ligase-substrate adaptor activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAVKP00000024827.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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