Detailed information of ENSAVKP00000025132.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: RMX58103.1, hypothetical protein pdam_00000099 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A1L8GXM0DNA repair protein RAD50.L OS=Xenopus laevis OX=8355 GN=rad50.L PE=1 SV=1
Q9JIL8DNA repair protein RAD50 OS=Rattus norvegicus OX=10116 GN=Rad50 PE=1 SV=1
Q92878DNA repair protein RAD50 OS=Homo sapiens OX=9606 GN=RAD50 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04423Rad50_zn_hookRad50 zinc hook motifMotifInterproscan
PF13476AAA_23AAA domainDomainInterproscan
PF01725Ham1p_likeHam1 familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004584FamilyDNA repair protein Rad50, eukaryotesInterproscan
IPR002637FamilyRdgB/HAM1Interproscan
IPR013134DomainRAD50, zinc hookInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038729DomainRad50/SbcC-type AAA domainInterproscan
IPR029001Homologous_superfamilyInosine triphosphate pyrophosphatase-likeInterproscan
IPR027502FamilyInosine triphosphate pyrophosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18867RAD50Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0009143Biological Processnucleoside triphosphate catabolic processInterproscan
GO:0047429Molecular Functionnucleoside triphosphate diphosphatase activityInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0000722Biological Processtelomere maintenance via recombinationInterproscan
GO:0000794Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003691Molecular Functiondouble-stranded telomeric DNA bindingInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043047Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051880Molecular FunctionG-quadruplex DNA bindingInterproscan
GO:0070192Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0090305Biological Processobsolete nucleic acid phosphodiester bond hydrolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10866RAD50; DNA repair protein RAD50EC:3.6.-.-
DNA repair and recombination proteinsko03400deepkoala

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