Gene detail

Detailed information of ENSAVKP00000026772.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_020604472.1, cartilage oligomeric matrix protein-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P35445	Cartilage oligomeric matrix protein OS=Bos taurus OX=9913 GN=COMP PE=1 SV=2
Q06441	Thrombospondin-4 OS=Xenopus laevis OX=8355 GN=thbs4 PE=2 SV=1
Q9R0G6	Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05735	TSP_C	Thrombospondin C-terminal region	Family	Interproscan
PF02412	TSP_3	Thrombospondin type 3 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR008859	Domain	Thrombospondin, C-terminal	Interproscan
IPR028974	Homologous_superfamily	TSP type-3 repeat	Interproscan
IPR003367	Repeat	Thrombospondin, type 3-like repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10199	THROMBOSPONDIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04659	THBS2S; thrombospondin 2/3/4/5	-	Glycosaminoglycan binding proteins	ko00536	deepkoala