Gene detail

Detailed information of ENSAVKP00000027900.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_044175304.1, uncharacterized protein LOC122958452 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAVKT00000030183

GCCAAAAACACATCCATCTAGCTGATAAATCGGAGTCGGGTTGGTTTACCGTAGACGAATACAAGAAGCATGATCTGGTGGAAGATTCTGACGACGAGAAGCGGATTCTCAGTGCCGAGCGGCGCGCTCGATTCACTTTGTCCactctgaaaaagaaaagaagcaggTCATTTGCCGCGAGCAGAAGATCTTCGCTTGTACGCCCGTCGGCTCCCTTTACTTCATCGGCCAGCTCTCAACAGCAACCTCAAGCCATTCAGTCTCTTGTGCCGTCTACGTTTACGGTTCGGCGTCCCAATATGGGCAGTTGTTTTGCTTGTGGCAAACCCGGGCATTGGCGTTCTACCTGTCCGGCGATGGCCAAACAGCAGCCTCCTTCAGCTTCAGGACTTCAAGATCAGGATAAATCCATTTGTGGTGCGTTTGTTCAATTGCAACCGGGAGTTGAGTTAGTGTCTCACCAGAACTGGTCGATCGTGGAGACCGCGCAAAGTTCAACGTGCAGGGAGCTTAAGGCTGTATGCCTCGCGTTAGAAGCATTTGCAAGCCACCTTTCGGGCTCTAAAGTCGTATGGTATTCTGACAACCAAAATATTGCTTCTATTCTCCTTAACGGCAGCCGAAAGGCCGACCTTCAATTGCTCGCCCTCCAAGCCTTCCACCTTTGTCTAAAGTTTCGTATATCTCTGGATCCTAAATGGATCCCTAGGGACCTAAGCTCTAGGGCAGATTTTATCAGTAGGCTTATCGACTTTGATGATTACGAACTTTACGACGTCATCTTTCAGGGCTTAGACGAGCTTTGCGGCCCTCATACCGTGGATAGGTTCGCCTGCATTAAAATGCCAAGCTACCAAGATTTAACTCTAGGTTTTTCCAACCAGGTTCTGAAGCGGTTGACGCGTTTTGCCAGGACTGGAGATTTAATAACAATTGGCTGTGTCCCCAAGTTTGTCTCATTGTTAGGGTCATTAAGCATCTGGAGTTGTGCCAGGCCAGAGGGACCCTAACAGTCCCCTTGTGGAAGTCATCCTACTTTTGGAATTCCTGTTCTAAAGACGGGGTCCACTGGAGCAGCTTTGTCATCGACTGGGTGTACCTTCCCAAGTACCAGGGACTGTTCATCAAAGGAAAAGCGCGCAACTCTCTCTTTGGTTCCAGATCGTTGGACTTCGACGTTTTAGCGCTTAGAATCGATTTCAGCCGTCCCAGGCCCACCTCGTCCCTTAGAGGGTTTTGCACACTGCCCCCTGGCAAATGTAGCTCGTGTTCTTAGGCGGTTACTCACTTTTTGCGATTACAGATTTTCCGTGTTTTCACAGTTGCTGTTTTGTATAAGGTTTCATTCTTTGACCTAAGCCCGTTTAGGTTCGCTATGTTGGTTTGGCGTCTTGCCTGTGCTTCGTTTTTATCATATGTGATTTAGACCTATTAAAGGCTCGCACGTATGTCCTGCTTATATTTTCTAATTACAGTTAtttagaaattgttttgtgcTCCTTTTTGTTTCCCCAGATGTTTTTTGCTCCGGTTTTCGCCGAGATCAGGTGACGCCAGGAGACAGATTCATTCAGGGTCTCACGGGCAGGTTGAGAACCGCGGTCCTATCCTCTAAAGCTTACAGCACCTCCTCCCAGTATCGCCGTGCATTTCGCAAGTGGAAGGAGCTCGCGGTCTGTAAGCTTAACGAGTCTAGTTTTCCCGCTGACTCCTTTCACGTAGCTCTTTATTTTCAGCATCTTATAGAGCAGGCCCAGTTTTCCAGCGTGATTGATTCCTCATTTTACGGCATCAAATGGGCCCATGATATGGCCGGGGTTCCATCCCCAACTGACAATTCTGTAGTCGAGATTGTCAGGTCAGCAGCCAAGAGAATTCTTGGCACTGCTGCTGTCAACCGCAAAGAGCCTATTTCCTCAGATCTGATTCGTAAAATTGTCAGCCAGGCTAATCTGGACAACCCTGTCGATTTACGCAATATTACTATGTATGTTCTTTGTTTCACTGGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF13456	RVT_3	Reverse transcriptase-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR052055	Family	Hepadnavirus polymerase/reverse transcriptase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33050	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan