Gene detail

Detailed information of ENSAVKP00000030007.1 in Catalaphyllia jardinei

Genomic Location: not available for this species
NR annotation: XP_020607404.1, uncharacterized protein LOC110046076 isoform X1 [Orbicella faveolata]
Species Catalaphyllia jardinei · all data for this species · gene families

Sequence

CDS

ENSAVKT00000032394

ttagtgaaaaaaatttggggggtTAGTACAACTTTAAGTATTCAATTATCATCTTTCCAGGTTCAATGTGACTTTGGTGACTCCTATTATTTGACAGAAACTACAGTCAAGGTGAACGGCTCTTTAACTTCACAGTTTAGCAATGCCCGGCGCTGCCATGTTAGACACAGTAGTGATTCAGCCATCATTCGTGTGACAGTGGGGGGATTTAACGCTTCAAGCAACTTAAGTGCACTGTACTCTATGGTCCTTGAAAACCTTAGAATTCAGTTTGTGGGTGTAGCGCAGTCACGTGACCTGGAAAATATGCAAAATTACTCATTTCATGCTTGCCCTCGTCTTGATTCTGGAAAAACAAGTGAGCATGACATAGATTTCCTATTCTTTGGCGCACCTGCCAATGACTTGTTTGCAATAGAAGTTGAGTTGGATAACTCTGTTTTATCTTCTGGTGAAACAGCAGAGTTTTCTGTTCGATCTGATGGCTTGGCTAGGGTCAGGGCATTCGACATTCAAGAGGAACAGCTTTTCAGCTTAATTCAAATTACAGTGTCTTCAGAAGAATCTGAAATGGAATGTCTCCTGGTGGTATCACGAAGTTGTGCTGCAGAACAAGGCCAAGGACTCTCTGAGAACAATGCTGGTGCAGAAAATCAGACTATTCAGCTTACTTTCACGGAGTCAGGCAGGATCACTTTGTCACAGTATTCTAGACCCAAAATTACAACAGGGCGGTGGTATATTGGATTGCGTAGCAAAAACGTTGACAAAGAAAGTGCCTTTGAGAAGACTGTGAAAGTTACTGTAGCACAAGGATATAAGTATGACACTATTGGTAAAGCTCTTCCAGCTGGTTACATGTGCCTTTTTGCTATATTCGGTGGCATTGCAATCAGTGTTTTTGCCCATTTCTTCCTGAATTCTGACTTTGATGAGTGTTCAGTTCCCTTTCATTTGGAGAACTCAGACGAAATGCCAAGGGCCAGAGCACCAAGTCGGGGAATTGTGGACTTTGTTCCAAAACCAATACCTCGAAAGACATTCCCCATAAAACTATGGCTGGAAGTCATCTGTATTGCATGGTTTTGCAAAGGTATAAAGACATACCCTTACTTAACCGGAGTACTGGCCATAAGTTTCATGGTTGGTTCAGCCCAGTTTGTAATTGCACGCTGGTCCAGTATGATAAAAGGAGGCGATCGTGACCTGTGCTACTACAATGAACTTTGTTATAGACCtattgccattgctgacatGCCTTCCAACTTCATGCTGAGCAACGTTCCTTATGTTATTCATGGTATTTTCCTTGCTCTATCATTCTCTTTCAGGGAAGCAATTACACTTCAGGTAAATGGATCAAAAAGAAAGTATATTCTCTCTCCAGACAATAAACAGTTCAGGCCATATGATTACTCAGTGGCTTACGCTCTTGCCTGGGCATTGGTCTTTGAAGGCCTGTTTTCAGCTATGTACCATCTGTGCCCTTCCCGTCTCACGTTCCAGTTTGACTCTGCCTTTATGTTCATCATTTCGGGGTTAGTTGTGGTAGCACTTTTCAACTGCCGAGTAAATAGTGAGGCTCTCATGGATGcagaggaaaaggaaaaaaaacatccCAGTAACACAACTGTCCAGGCACCAAAGTACTTCTTATTCTTTGTGGCACCACTGCTGGTGTTTAACTATGTGGGTTCTGTGCGGGATACTGATGGTCTAACAAGTTTCTTTGAAGTGACCTACTGGATTGCCCTGGTCATTTGGTTGGTTGCTTTGTACATCTGGACTTTCCAGAAGGTTGGTGTTCCTTGTAGGTGGAAAATTGAAGATTGCTGGTCACTAGAGGCTGCAGTGAAGTGGACCTGGATTATCATATTTCCTCTTTGCCTGCTCATTATAGGTTTTAAACAGAAAAATGACTGGTCACAGTTTTTCCTGTTTTCTTGTGTGGCTGCCGTGGCACTGACCATTCTTGGTTTGATGAGCTTTGACGTAGCATTGTCTCTCAAGAGACAGAGAAGTGAGAATGGAGATTGCTGTGGTGGAATAAAACAACTTTGCAACCCAAGACTGATCTGGAAAGCCATTTGGAGAAACTGGCATCGTGTGCTGTTTATGATTACCACCTTCATCTTCTGGGTGTTTGCCATGTACTTCTTTAAATTGAAATCCACCACTCGCAAGGTTGCAGCACCAAGCTTTTCACGTTCTTTGAACGCAGAATGTGTCTTGTGGGACTTTTTTGACTACCATGACCTCTGGCATATGCTGTCTTCATTTGCCCTTTTGATGAGTGCATACCTGTTGATTTATGTTACCCGCAAGGTTGAGATTTATTCCTATGCGGAGAGGATGTACTGGAAAAGTAGAGATACGACTATGATGCAGATAGATGATGCAGGTAAGGAAAACAGTTATGAAATAGTGGAAGAGGTACCACTGTATAAAGTTAAGTCAACATtcaagccaagtggctcatcaggccagagcttatctgGGTTTCAGTGGCATGAAGTATCTAGGTGTATTCtactcaccccccccccccccttgatgggatgctag

Transcript

ENSAVKT00000032394

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001213 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13965 all species →	SID-1_RNA_chan	dsRNA-gated channel SID-1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025958 all species →	Family	SID1 transmembrane family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12185 all species →	SID1 TRANSMEMBRANE FAMILY MEMEBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003725 all species →	Molecular Function	double-stranded RNA binding	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0050658 all species →	Biological Process	RNA transport	Interproscan
GO:0051033 all species →	Molecular Function	RNA transmembrane transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26562	NPF5, NRT1, NAET; MFS transporter, POT/PTR family, peptide/nitrate/nicotianamine transporter	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.