Gene detail

Detailed information of ENSAVKP00000032049.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_020604381.1, LOW QUALITY PROTEIN: S1 RNA-binding domain-containing protein 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8N5C6	S1 RNA-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SRBD1 PE=1 SV=2
Q497V5	S1 RNA-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Srbd1 PE=2 SV=3
Q5RDI0	S1 RNA-binding domain-containing protein 1 OS=Pongo abelii OX=9601 GN=SRBD1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17674	HHH_9	HHH domain	Domain	Interproscan
PF00575	S1	S1 RNA binding domain	Domain	Interproscan
PF12836	HHH_3	Helix-hairpin-helix motif	Domain	Interproscan
PF16921	Tex_YqgF	Tex protein YqgF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR010994	Homologous_superfamily	RuvA domain 2-like	Interproscan
IPR003029	Domain	S1 domain	Interproscan
IPR050437	Family	Bacterial ribosomal protein bS1	Interproscan
IPR037027	Homologous_superfamily	YqgF/RNase H-like domain superfamily	Interproscan
IPR041692	Domain	HHH domain 9	Interproscan
IPR006641	Domain	YqgF/RNase H-like domain	Interproscan
IPR032639	Domain	Tex protein, YqgF-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10724	30S RIBOSOMAL PROTEIN S1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0006139	Biological Process	nucleobase-containing compound metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03241	EIF2B3; translation initiation factor eIF-2B subunit gamma	-	Translation factors	ko03012	deepkoala