Detailed information of ENSAVKP00000032076.1 in Catalaphyllia jardinei

Genomic Location: chr5:8538310...8541868
NR annotation: XP_020604381.1, LOW QUALITY PROTEIN: S1 RNA-binding domain-containing protein 1-like [Orbicella faveolata]
Species Catalaphyllia jardinei · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RDI0S1 RNA-binding domain-containing protein 1 OS=Pongo abelii OX=9601 GN=SRBD1 PE=2 SV=1
Q497V5S1 RNA-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Srbd1 PE=2 SV=3
Q8N5C6S1 RNA-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SRBD1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003732 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09371
all species →		Tex_NTex-like protein N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018974
all species →		DomainTex-like protein, N-terminalInterproscan
IPR023319
all species →		Homologous_superfamilyTex-like protein, HTH domain superfamilyInterproscan
IPR050437
all species →		FamilyBacterial ribosomal protein bS1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10724
all species →		30S RIBOSOMAL PROTEIN S1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAVKP00000032076.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP