Detailed information of ENSAVKP00000033231.1 in Catalaphyllia jardinei

Genomic Location: chr6:29611314...29619550
NR annotation: XP_020611267.1, tRNA-splicing endonuclease subunit Sen54-like [Orbicella faveolata]
Species Catalaphyllia jardinei · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C2A2tRNA-splicing endonuclease subunit Sen54 OS=Mus musculus OX=10090 GN=Tsen54 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005203 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12928
all species →		tRNA_int_end_N2tRNA-splicing endonuclease subunit sen54 N-termDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024337
all species →		FamilytRNA-splicing endonuclease, subunit Sen54Interproscan
IPR024336
all species →		DomaintRNA-splicing endonuclease, subunit Sen54, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21027
all species →		TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000214
all species →		Cellular ComponenttRNA-intron endonuclease complexInterproscan
GO:0000379
all species →		Biological ProcesstRNA-type intron splice site recognition and cleavageInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15326TSEN54; tRNA-splicing endonuclease subunit Sen54-Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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