Detailed information of ENSAVKP00000034862.1 in Catalaphyllia jardinei

Genomic Location: chr6:31845072...31860625
NR annotation: XP_020632925.1, regulator of microtubule dynamics protein 1-like isoform X2 [Orbicella faveolata]
Species Catalaphyllia jardinei · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DCV4Regulator of microtubule dynamics protein 1 OS=Mus musculus OX=10090 GN=Rmdn1 PE=1 SV=2
Q4G069Regulator of microtubule dynamics protein 1 OS=Rattus norvegicus OX=10116 GN=Rmdn1 PE=2 SV=1
Q5R8E4Regulator of microtubule dynamics protein 1 OS=Pongo abelii OX=9601 GN=RMDN1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001272 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21033
all species →		RMD1-3Regulator of microtubule dynamics protein 1-3RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049039
all species →		RepeatRegulator of microtubule dynamics protein 1-3, alpha helical repeatsInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16056
all species →		REGULATOR OF MICROTUBULE DYNAMICS PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005876
all species →		Cellular Componentspindle microtubuleInterproscan
GO:0008017
all species →		Molecular Functionmicrotubule bindingInterproscan
GO:0097431
all species →		Cellular Componentmitotic spindle poleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAVKP00000034862.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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