Gene detail

Detailed information of ENSAVKP00000035026.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_020607350.1, DNA-dependent protein kinase catalytic subunit-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAVKT00000037842

ATGTCGGACTCCTTGACGAGTTTGTCTTCGCAGCTTCACTCTCTCCTATCATCGGATGCCCTGCACCGAGGTGTAGATGCAACTAACATTGTAGTTGATCTTGCAAGTTTCTGTTTGGAGAATGTCTCTGAGATAGAGCAAGCTTATTGTTCTTCACTTCTGTTCCATGAAGAGACAGGCATAGTGAGTTTCTTGAGAAAAGCAATTGCCCTGGATGAGTTTTCAGATGCCAAGGTAGAGCTGCTTAAATTTCTTAAATCCTATGTCACTGTGCTCGGGAAGAAAGTAAATCCTTATGTTCTGGATATAAAGgACATTTGTGTTAAAATCTTCTCCCAAGATCGCAGCAACAAGGCAAAGGTGGAAACTTTCCCTCTTCTTACCCAGATTTTAGAAATCAAACTGGAATCCTCTGTTATGGAAGAACTGAACGTCCCAAGGATGATTGACAAATACTTCGGAGCTTGTATGCAGCCATCTAAACACTCATCTACAGtAAAACACTGGTTGTACTCCTTGTTGGGCACCTTTGCAGAAGTATTTCCAGAATTTATGCTCAGTCACTCTGACCGGCTTGTTTCTATTTATATCAGTGTTCTTAAGTcacagATGACAAGCAAGGCCAAGAAACCAGATATGCCTGTTATTTCTGGATGCTTGAGAGGTTTGACTTCTTACCTGACAAACTTCACACAATCTGTTGAAGAAGGCTCTAGGTATGCCAAGGACATCTACAGCTACACAAAAATGGCTGTCAATCCACAAGACAGTCTGAGTCGTTATGATGTACCAAAGGCTGGCTTGTACTTGTTTGCAAAACATGCAGCTCAGTTCAAGGAATATATTGCTAAAGATCATGAGGTGATATATGAAGCGTTTTATCGTTGGTGTAAACATCAAAACAAGGAATTAAGCTATGCTGGATATGCAGCCATGGAGGCATTTTTGAAGCAGATGTCAGAATATTTTATTTTGAGGTGTGGGGATAAATCAGATGCGGTAATGTTCAAGTATTTTATCAAGACGTTTCGTGCAATCATGGATTCCGCATCCAGTGATACAAGACAGATGTCAGTTGCAATAAGAGGTTATGGATACTTCTCAAAGCCCTGCAAACTGTTCATGCAAGCTTCAGATGTGAAGTTCATGTTAAGTGAGATGATGCAGAGAAGTGAGCAGATATATTTTGGACAAGATGAACTGTCAGAAGACAAAGTTCAGCATCTTCCAAGTTTCTTAGAAGCCCTGTCTTGCATTGTTGAAGAAATGGAGGAGATTTCTGACTTCGTCCTTGCTTCTCTGGAGAGACTGGTAGTGGTTTTATTTAACAACTTCGCAAGGTTGACAAAGGAATCTAGATTTATCTGTTGCAAGTCCCTTGTCAGGATGCTTTTTAACCTCTCTTCCAAGGGTGCAGTACTGAGGCGTTTTCTTTCAGAAGTGGTATACCAAGGTCTAATAAGAACCTGCTCACATCCAGTTGCTTTAGAAGAGGTAAATGACATTGGTGTATCAGTGGACAAAAAGATCAGTGATACTCCCGAGGTATCTTACAAAGATTACTTGGGGCTGTGGGAATTTCTCTTGGAGAAGAGCAAGTTTAAGGATGTCAGCTTGTTAGGACAAAAGCTTGAACAACGTGAAGCCATGTATGGGATAATATATGATGAAATGGTAAAAGCTATTCTTCGTATCATTCATAAGCTGGATTTGTCTTCTGTAAAGGGTTCATCATCAGTACTAGAGGGTGATGATATTCCTGTTACTGCCAGTACTTCCACTACTGATGGTCCAGTCTCACCTCTGGGGAAAGTGTCATTGTCTGATCCAGTTGTAGGACTTCAACCTAAAGTTCCTAAAGATTTTCAGATTTTCCTTAATCTTATCGAGTTCTGCAGGTGTGTTCTTCCAACGTACTCTGTGACATCATTTGAGCAGTGGATATATGTATTTGGCAGAGACATAATTCTCATGTCTACCAGGTTCCCAGTTGTCAGTGGATTCTATAAATTGTTGGAAGTTTGTATGAAAATCTGTGACAAGCTGTTTTTCTTTAAGAATATAAAGGCAGAAAGTCCAGACCATAACAGTGAAGACTTAGACATGGAAATTGTAGATTCCTCTGACTGTATGACATGCTTTGTGCTCTTCCACAAGTTCACAAAAGAGgttcttATTAGAATGCAACAGTATAAAGATGATCTGTTGGCTTCCTGTTTAAGACTGGTTCTATCACTTCCTCTTGAAGTAGTCATTGTGGATTTTGCTTCTTTGGTACCTGCATTAAAGtttttctCACATCCCTACTATTGTTTTTAA

Transcript

ENSAVKT00000037842

TGGCAGCTTTGGCGTAAAGTGGGGCTGCAAGGATGTGATTATAGCTACGGGTAGCGCACAACCTGTGTAATGTCGGACTCCTTGACGAGTTTGTCTTCGCAGCTTCACTCTCTCCTATCATCGGATGCCCTGCACCGAGGTGTAGATGCAACTAACATTGTAGTTGATCTTGCAAGTTTCTGTTTGGAGAATGTCTCTGAGATAGAGCAAGCTTATTGTTCTTCACTTCTGTTCCATGAAGAGACAGGCATAGTGAGTTTCTTGAGAAAAGCAATTGCCCTGGATGAGTTTTCAGATGCCAAGGTAGAGCTGCTTAAATTTCTTAAATCCTATGTCACTGTGCTCGGGAAGAAAGTAAATCCTTATGTTCTGGATATAAAGgACATTTGTGTTAAAATCTTCTCCCAAGATCGCAGCAACAAGGCAAAGGTGGAAACTTTCCCTCTTCTTACCCAGATTTTAGAAATCAAACTGGAATCCTCTGTTATGGAAGAACTGAACGTCCCAAGGATGATTGACAAATACTTCGGAGCTTGTATGCAGCCATCTAAACACTCATCTACAGtAAAACACTGGTTGTACTCCTTGTTGGGCACCTTTGCAGAAGTATTTCCAGAATTTATGCTCAGTCACTCTGACCGGCTTGTTTCTATTTATATCAGTGTTCTTAAGTcacagATGACAAGCAAGGCCAAGAAACCAGATATGCCTGTTATTTCTGGATGCTTGAGAGGTTTGACTTCTTACCTGACAAACTTCACACAATCTGTTGAAGAAGGCTCTAGGTATGCCAAGGACATCTACAGCTACACAAAAATGGCTGTCAATCCACAAGACAGTCTGAGTCGTTATGATGTACCAAAGGCTGGCTTGTACTTGTTTGCAAAACATGCAGCTCAGTTCAAGGAATATATTGCTAAAGATCATGAGGTGATATATGAAGCGTTTTATCGTTGGTGTAAACATCAAAACAAGGAATTAAGCTATGCTGGATATGCAGCCATGGAGGCATTTTTGAAGCAGATGTCAGAATATTTTATTTTGAGGTGTGGGGATAAATCAGATGCGGTAATGTTCAAGTATTTTATCAAGACGTTTCGTGCAATCATGGATTCCGCATCCAGTGATACAAGACAGATGTCAGTTGCAATAAGAGGTTATGGATACTTCTCAAAGCCCTGCAAACTGTTCATGCAAGCTTCAGATGTGAAGTTCATGTTAAGTGAGATGATGCAGAGAAGTGAGCAGATATATTTTGGACAAGATGAACTGTCAGAAGACAAAGTTCAGCATCTTCCAAGTTTCTTAGAAGCCCTGTCTTGCATTGTTGAAGAAATGGAGGAGATTTCTGACTTCGTCCTTGCTTCTCTGGAGAGACTGGTAGTGGTTTTATTTAACAACTTCGCAAGGTTGACAAAGGAATCTAGATTTATCTGTTGCAAGTCCCTTGTCAGGATGCTTTTTAACCTCTCTTCCAAGGGTGCAGTACTGAGGCGTTTTCTTTCAGAAGTGGTATACCAAGGTCTAATAAGAACCTGCTCACATCCAGTTGCTTTAGAAGAGGTAAATGACATTGGTGTATCAGTGGACAAAAAGATCAGTGATACTCCCGAGGTATCTTACAAAGATTACTTGGGGCTGTGGGAATTTCTCTTGGAGAAGAGCAAGTTTAAGGATGTCAGCTTGTTAGGACAAAAGCTTGAACAACGTGAAGCCATGTATGGGATAATATATGATGAAATGGTAAAAGCTATTCTTCGTATCATTCATAAGCTGGATTTGTCTTCTGTAAAGGGTTCATCATCAGTACTAGAGGGTGATGATATTCCTGTTACTGCCAGTACTTCCACTACTGATGGTCCAGTCTCACCTCTGGGGAAAGTGTCATTGTCTGATCCAGTTGTAGGACTTCAACCTAAAGTTCCTAAAGATTTTCAGATTTTCCTTAATCTTATCGAGTTCTGCAGGTGTGTTCTTCCAACGTACTCTGTGACATCATTTGAGCAGTGGATATATGTATTTGGCAGAGACATAATTCTCATGTCTACCAGGTTCCCAGTTGTCAGTGGATTCTATAAATTGTTGGAAGTTTGTATGAAAATCTGTGACAAGCTGTTTTTCTTTAAGAATATAAAGGCAGAAAGTCCAGACCATAACAGTGAAGACTTAGACATGGAAATTGTAGATTCCTCTGACTGTATGACATGCTTTGTGCTCTTCCACAAGTTCACAAAAGAGgttcttATTAGAATGCAACAGTATAAAGATGATCTGTTGGCTTCCTGTTTAAGACTGGTTCTATCACTTCCTCTTGAAGTAGTCATTGTGGATTTTGCTTCTTTGGTACCTGCATTAAAGtttttctCACATCCCTACTATTGTTTTTAATGGTCATTGTCAGAGAAGGTTGAAGCCCCG

Protein

Uniprot

Uniprot term	Description
P97313	DNA-dependent protein kinase catalytic subunit OS=Mus musculus OX=10090 GN=Prkdc PE=1 SV=3
Q8WN22	DNA-dependent protein kinase catalytic subunit OS=Canis lupus familiaris OX=9615 GN=PRKDC PE=2 SV=1
P78527	DNA-dependent protein kinase catalytic subunit OS=Homo sapiens OX=9606 GN=PRKDC PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20500	DNA-PKcs_N	DNA-PKcs, N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046804	Domain	DNA-PKcs, N-terminal	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06671	STAG1_2, SCC3, IRR1; cohesin complex subunit SA-1/2	-	Chromosome and associated proteins	ko03036	deepkoala