Gene detail

Detailed information of ENSAVKP00000037619.1 in Catalaphyllia jardinei

Genomic Location: chr6:9568545...9602207
NR annotation: XP_020613025.1, LOW QUALITY PROTEIN: oxysterol-binding protein-related protein 8-like [Orbicella faveolata]
Species Catalaphyllia jardinei · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSAVKT00000040608

atgccaatcaaatttcttgtaaTTAATTTTGCAGACATAGACTCTCCAGTTAACTCTGTTCTCTCTTTTCTACTTtgttATATTACCAGCTCAAACTGTTTGATTCTCTTTTCAGCTGACACTGCATTACTTATTGGAAATCTGTCACGGAGCAAGGCCAGCAATGATAATGGTGAAGAGGATCGAAGTTTACCACCTGGAGGAAGTCCATCAGCTCAAGATGAGGCAGAgggtaattttaaatttgatgGCCCCGGGTCAAGGAATTCAACTCAATCTGTCAAGTCAGATAAGAGGGATAGAGATAAAGAGAGACTGCAGCATCTGGAGAAGAAACTTTCTCAAACTGACAGATCTCCTAATTTTCCGAGGAAGACCGCCAAGGAGTCTTTCAAGGCCATGAAAGAGAGTTACAGACAAGAACAGAAGCGAAGAATAAAGGAGTTATCTAGTGCACTGAAGGACCCTTCAGTTATTATTCTTTCATCTTGGCTCAAGgtgCGTGGTACACTGAAAGGTTGGGCCAAGTTCTGGTGTGTTGTGAAGCCGGGTATGCTTCTTATTTACAAAAGTGCAAAGCATGGTCAGTGGGTGGGTACTGTGCTCTTGACCGGTTGTGAGATTCTACAGAGGCCCTCCAAGAAAGAAGGATTTTGCTTTAAGATCTACCACCCCCTGGAACACTACATTTGGTCAACAAAGGGTCCCAAGGGGGAGTTAGCAGGGTCAATTGCTCAACCCATGCCTAAGGATTATCTTATCTTACGGGCTGATTCAGAGTCTGATGGTCGCTGTTGGCTGGATGCATTAGAAGTTGCTCAAAACCAAGGATACACCATTCAAAAGGATAACAAAGGAATGTTAAGTGAGCTCTATGGCAAAGATGACAAAGAAGACAGAGATGATGAAAGTGGGATTCCAGGCATTCCAGGTAAAAGTTACTCTGAGAATGAATTGGATGACACTATAGGACCACTGGGTAGAGAAGGTGATGATGAGGTAGAAGAAGGACCTATTGTAGAAACAGTTTACATAAGTGAGAAGGGAGAGGAGTACTTAGGACAGGAAGGTGAGGCATTGGAGGAGATTGAagatgaaaacaaaagtattcTTTGGGCACTTCTCAAACAGGTTAAACCAGGTATGGATCTCTCCAGAGTTACTTTGCCAACCTTCATTCTGGAACCCAGGTCATTTCTTGACAAACtgtctgatttttatttccatCTCCTGTGGTCTCCTGTTTCTGTTGTGCATGTTTGCTGTGGACAAAAAGGCCATTTGGGCTTAAAGAAACCTTACAATCCTATTCTGGGTGAGACATTTCGCTGCTTCTGGCTTCACCCAAATGGCACCAAGACACACTTCGTAGCCGAACAGGTTTCACATCATCCTCCAGTATCAGCATTTTATGTGTCCAATAGAAAGGAGGGGTATGTGGTCAACTGCTCATGCCTGGCCAAGTCAAAATTTTATGGTGATTGCTGTTGTATAATATGCTGTTGTATTTTGATCGGCACTCTAACAATGGAACTGGGAGGTGTCGTCACAATAAACTGCGAGAAGACTGGGTACAAGGCTGAAATTGAATTTAAACTCAAGCCTTTCTGGAAGAAAAGTGGAGAATCCAATTACATTAATGGCAAGATAAAAATGGGCAAAGAGACACTGTGCAGGATAGAAGGAAAATGGgaTAGCGAGATTGTTATCACAGACTTGAAGTCTCCAATTCCTGCAGGGGAGATTGAACCTTTGCCTGAACTGTTTTGGGATCCAACCCCTGAAATCAGAAACCAAAGACTTCCAAGACATTTGGTAGACTACAATACTCAAGGAGAATTTGAATCTGAGAAGTTCTCATTTCATCGTTTTACCAAGGAATACTCATTTCTCTTTTTGTCAAAAATTGTTCAGGAAAAGGCAACAAATGAGAAGTTTATTCTTGAAGAAGCACAGCGGAAGGGTCACAGAGAAAGAAGGGAAGCAGGAGTAGAATGGATTCCTAAACTGTTTGAACGAGATCCAGCTGCACCTAATGCAATCAACCGCTGGCTCTACAAATACAGGGATGTAAGACCATGGGACCCAATGACAGACCTAAAGGAATATGAACATGAAGGTATTGTCAAGACTCAGTACAGACTTAAAGCACCCATGGTAAGAACAACCAGCCTTCTTAGTGTTCAAACACCAGATGCTAAGAAACCAATATCAAAACGAAAACGGCCCTCATCAGGTCGATCGCGTGGCAGCATCCAAGTGAAAGGATCACGACGGAATTCAGTGGACCGGTCAGGTGCATCTACACCCGATCCCGAAGCTGAACATTCAAGCAGTGtcgaagatgatgatgatgattcaaGCATTAAGGAAAGCATTGACCTGGCAAGTCTAGAAAAGGTATTTCAACCACTGAAGGATTTGCAGAAGGAATGTGTGCAGCAAATGAGAGCCATCAGAAGCGATCTACGTCGCCATTACTCCTCTCATCAGGATGACCTCACTACACTTCAGTTCAAAGACTGGCTCTTGCTACTCATGTTTGTTATCACTCAGGGTTTCTTCCATTGGTACTACAGATGA

Transcript

ENSAVKT00000040608

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B9EJ86	Oxysterol-binding protein-related protein 8 OS=Mus musculus OX=10090 GN=Osbpl8 PE=1 SV=1
Q9BZF1	Oxysterol-binding protein-related protein 8 OS=Homo sapiens OX=9606 GN=OSBPL8 PE=1 SV=3
Q9ER64	Oxysterol-binding protein-related protein 5 OS=Mus musculus OX=10090 GN=Osbpl5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002661 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01237 all species →	Oxysterol_BP	Oxysterol-binding protein	Family	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR018494 all species →	Conserved_site	Oxysterol-binding protein, conserved site	Interproscan
IPR000648 all species →	Family	Oxysterol-binding protein	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR037239 all species →	Homologous_superfamily	Oxysterol-binding protein superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10972 all species →	OXYSTEROL-BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008289 all species →	Molecular Function	lipid binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0015248 all species →	Molecular Function	obsolete sterol transporter activity	Interproscan
GO:0015485 all species →	Molecular Function	cholesterol binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0032934 all species →	Molecular Function	sterol binding	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAVKP00000037619.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.