Gene detail

Detailed information of ENSAVKP00000038642.1 in Catalaphyllia jardinei

Genomic Location: not available for this species
NR annotation: XP_027047247.1, protein phosphatase 1 regulatory subunit pprA-like [Pocillopora damicornis]
Species abbreviation CJARD · all data for this species · gene families

Sequence

CDS

Transcript

ENSAVKT00000041761

AGAGACACATTGCAAGAACTCTGTTTTCCTTAAAAAATTGTGTCATTGATCTTTATCTCTGAAAAGTAGACACAACTGAGAGGCAGAAAATTTACTCCAGCCTCGTCGGAGCATTTAGCCTTGATGCTGTCTGCGTCAAGATCGCAGAAGCAAAGTTTTTCTGAAAAGAAGAATgacaaattgaaatcaaaatctGCCTCACCCACTCTTAGAAAGCCTATTAAGGAACCATCACAGGAGAAACGAATCCAGTCTTCAACGAATGAGAGGGAGTCAGGGAAGTTAAGTGTGCAGGAGATTCTTGACAGATGTCAGGAAGGTGAATGTGGACGAGTTTTTGAGATCAACCTCAATGGACAAGCTCTGGAACAAGTTCCAGATCTAAAAGAGTTCCCAAAACTGAAAATCCTTGACCTGGGATGTAACAAAATGAAGCGTGTGTCATCTAGTGATTTGGAGAAGAACTGTGATCTTCGAGAGCTGAAACTCTATGCAAATGAAATTACAGAGATCAGTGGTTTAGATCGCTGTAAAGAGCTAAATAATCTTCTTCTGCagcacaataaaataaaatgtatagGTAAAGGTCTACAGCATGTGAGAAAACTCAAAGTTTTGAGGATTGATAACAACCGTCTGTCCAAGATTGATTATAGGGAAATTGGTTGCTGCTCACAAATAACTGTACTTGATGTCAGCTGTAATAACATCACTGATGTTTCTGCCTTGAATGGCCTTCCTGCACTTGAGGAGCTTGAtttatcaaacaacaaaatcagcAAAATTCCTGACCTAGGAAGATGCAGAAAGATCCAAGAACTGGATATCTCCAGAAATCAAATCTCAGACTTATCTGGTTTGAAGGGTCTTCCTAACCTTACAGTTTTAAGAGTGGAAAATAATCAAATAGAAACCCTTGAGTCATTGGGAAAGTTAAGGGGTCTACAAGAACTATATCTATCAAGTAACAGAATATCAGAAGTAAAGTCCTTTGCCAATCAGTTTCCTTCACTGGAAATCTTGGATTTGTCAAAGAATTTCATCGCAGCAGTGGAAGAAATGTTTACGCTGTCAAGTATTTCTTCGCTCATAGAACTGACCGTAGCAGGAAATCCTTGTGAATCGGCAGACACTTTTGGCTGTCATCGCCTGATATTTCAGACACTGACGTCGCTGGAAATTCTTGATAAAgtGCCACGTAAGAGACCCAGCACAGGTCAATCACGTGCTCCACCCGCTCCGATGAGACCGATGTCTGCTACACAAGTTTTGAGTGCAAAACAAGTCGAGGAGCAGATAAAAGCAACAGATCTTGAGCAAACTTCTTTTGAGGCGTCTATCGCTTCACGGTTTAGTATGGTAAAAGATCTATTTGAGTCCCTACCTAAGGAATCAGCCACTGAATTGCGTCAGCCACAGTTAACAGAGTCAGCCATATTTGATTTAGACTCTGGCAATTTTTCCCGACCAGGTACAGCTGGAGAGGGAAGACCTGCCAGTCGGTGCAGCAGCCGCTCAAGAATCGCTGAAGCCCGTGCATTTGCCGCAGAACACTTCACCCTGGACACACCTGACAATTAATTTGCAACTGGATTAAAGTGTATCACCGGAAAGAGTAGCCAGTGATAAGATATTCATAGAAAAGCCATCAAGAATGGTTTTTGAAAAGGTTTATGCAGTCAAGGTCGTTCTAAACATGTGTGAAGTACAAATGCGTAAACTACGGAATTTGTACTCTTTGGGCTTTGAATCGCAGATACTTATCTTGAATGTATTTGTAAATTATACGTTGTAAATAAACTGTAGAGTGAGTATTTAATTGCCTGTTCCTCAGTTTGAAATACACTCTTAAACTTTGAATAGAGAATACTTCAAGTCAGATTTATCTTAATATTTTTTCTCGGCACCTTAGCATTTCTTATTGCTAGAGGCCTAACAAGCCGCATTTCCTCACGAGTATCAATAAAGTCATCATCTCCGCTTTGAGAAATAAAATACCCAATATTAAAGAACAAGAGGATTTCTTGgctttttatcata

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006140 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12799 all species →	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR025875 all species →	Repeat	Leucine rich repeat 4	Interproscan
IPR050576 all species →	Family	Ciliary and flagellar integrity-associated protein	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45973 all species →	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAVKP00000038642.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.