Gene detail

Detailed information of ENSAVKP00000041591.1 in Catalaphyllia jardinei

Genomic Location: chr9:23623963...23637609
NR annotation: XP_020604538.1, uncharacterized protein LOC110043430 [Orbicella faveolata]
Species Catalaphyllia jardinei · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSAVKT00000045014

ATGGCTTTGCTTGACCCGAAGTTCTATTCAAATAATGTTTTGGTTGTCGGGGACGGTAACTTTTCATTCACTGTTTGCTTAGCGTCTGCTTTATCAGAGACGTCGGTCAAGATCGTGGCAACATCTCTGGATTCGCGCGCTTCCTTAGCGAAGAATGGCTTTGCTGTTGAAAATATCGATAAATTATCTGCTTTTAAGAACGTTGAGATCTTGCATGAGGTAGATGCAGCGAATCTGACTGGAAAATTTGGCCCAAGAATCTTTGACCGAGTGATCTTTAATTTCCCACATACTGGTGGAAAATCAAATATCGGCAAGTCGAGAGAGCTTCTGGAGAGGTTCTTTGCAAGTGCTGCACATCACGTTGACATCAATGGGGATATTTGTGTGAGCCTTTGCCAAGGCCAGGGAGGGACACCTTTGGACAACCCTAGAAGGGAGCATGGAAACACGTGGCAGGTTGTTTCTCGAGCCGCTAAAGCAGGTCTAATTTTGAATGCTGTATATCCATTTAGAAGTATAGATTATACTTCTTACAGAAGTGCAGGCTTTCGTGGACAGCTTGATAAAGGTTTCCACACTATCAATGGTCTTACTCATGTGTTTGTGCCCGGAGTGCCACTGGAAACTGTCCCAGACTTAGAgaattttatttccaattaCAAGACCATCTCAAGAGACCTCTACCCAGAAGATGGTCTCAGTTGTGTTTCCAGTAATCCTGTTTTTATATTGGTCAACAATCTGAgaagtttcttttcaaatcacAATGTCTGTGAAACAAATGTTGGGCCATTATGCAGTTACAGCGATTCAGAAGACATAACAGTGAGTAGTATGAATCGACAAGCTGAACATTTGAACATTGATGGAGACGAATTTGTAAAATCTCAGAAATCGTTAACAGATGCCCACATGTCAGTTTCAAGTAGGGTTCTTCAGAAGCTTCAAGCAAATTGTCATTCCTTTCTCATTAGTGGTACTGAGCGTGACTTCTTCTTTTCTCCATCCTCCCACACTCATCCCATTAGACATAAAATTGTGGCATGTCGGACTTTCACAGaaccaacaacaacagctttaaaAGTGAAAGCAGATGTGGATGATATTATACATGCATTTGCCAGAGAAATTTGTTCTTCTCTTGATGGCTTAAGAACAGAAAGTGGTTGTCAAACCTTACCACAAAAAGATCTTCTTTCTGATACAGCTTCAGTGGGCTTTCAGGCAGTCCAATTAAAATGTGGAAGGCAGACAAAATTTCAGAATGCCAGAAATGCAGCTAGTGCAGGGACTGGATGTGAATGCAAAAATCTAACTGGGCAAAAGAAGTGCATTTTTTGTAGGTTGGAGAGCCACTATCTTGGGCATAACATCCCTCCACATGTTTCTATCAGTGACCTTTACCAAGCTTCCACACAAATGAAACTCTATGATAAAGAGAGGCTGTTACTAACGTGGGGTCTACTGGATTCTGACAAATCTCCACATGCTTGTTGTGGTTGGCTGATGGAAATTGACATTGATAACTTGGTTATGGCTTTGTACCGGATTCCTGATATACGAATGCTGTGGTCAAGGGATCAAAGGTTTAAGGAACAGTTTTCAGGCCTAGAGGTAAGGCTATTACCTGTAACGATATCAATTGATGTTTTGCATCACAAGATTAGATCACATGACTGTATTTGGAATTCTTGTCCACAAAATCTTGATGTATGTTGTAACTGCAACTTCTATCAGTTTCAAGACCTTGCAAAAGAATTTGTGCCATTCAGTCTCTTTCCTCCAAACTACATCCACGACATAAGTTTTTGGATAACTGAACATTTGACAGAAAAGCAGTTCTTTCAGGATATCTATGAAACCACCCAAGGATGTGTATGTGATGTTTGGTTCATTGAACGTTACCATGATATAGAACAGGATAAAGTGAGTTATAATTACCGCATGGTTTACAGCTCATGTGACAGACCACTGAACCATATCCAGACAGTAAAAATGCAAAACTTATTAAGGAGAAAGCTCTTGAATTGTGACTTTCAACTCAAATAA

Transcript

ENSAVKT00000045014

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9BRP7	Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=FDXACB1 PE=1 SV=3
Q3UY23	Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus musculus OX=10090 GN=Fdxacb1 PE=2 SV=2
P0C8L4	Uncharacterized protein At4g26485 OS=Arabidopsis thaliana OX=3702 GN=At4g26485 PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003881 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10354 all species →	BMT5-like	rRNA (uridine-N3-)-methyltransferase BTM5-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036690 all species →	Homologous_superfamily	Ferrodoxin-fold anticodon-binding domain superfamily	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR005121 all species →	Domain	Ferrodoxin-fold anticodon-binding domain	Interproscan
IPR019446 all species →	Domain	25S rRNA (uridine-N(3))-methyltransferase BMT5-like	Interproscan
IPR045864 all species →	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11538 all species →	PHENYLALANYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0070042 all species →	Molecular Function	rRNA (uridine-N3-)-methyltransferase activity	Interproscan
GO:0070475 all species →	Biological Process	rRNA base methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAVKP00000041591.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.