Gene detail

Detailed information of ENSAVKP00000043498.1 in Catalaphyllia jardinei

Genomic Location: not available for this species
NR annotation: XP_020601680.1, RILP-like protein 1 [Orbicella faveolata]
Species Catalaphyllia jardinei · all data for this species · gene families

Sequence

CDS

Transcript

ENSAVKT00000047087

TACAGAAAGAACAGGAAGTGAACAGGAGATCGAGAGCAAACACCCAAATCAAATGTTCGGTACGAGAAGAGTGTACGCACATATGTTTCCAAGATTCGGAGTTATTTTTGTTCGGAAGTCGTTATTTCTCTAAGGTTTCTTAACGAGAATTTTTTTGGTTACACCGTTATCGAGCCTTGTACGGGAAACCGCTAATTTATCAACGCTTTTCACGGTGTTCTTGTAGTTATTACATGTAATTGCGACATATCCAGAGAAAGATCCTTTTCCAGAGTTGGTCCTCGCGTTGTGATCACATCATGGCTGCCGATCTTACGACTGCCGATGTCTACGAAGATGCTTCTCTGATCGGTCAAGACATTGAGAAAATTATTGAACGTTTTGGACACGACGCAATGATGGATTTGATGCCTAAGATCATTCGTGTGCTCGAGAAACTTGAGATCGTTGTCGGTGAAAGAGAAAAGGACAAACTTGAGATCGCTGAACTGAAACTAGAAAATGAAAGACTCTACTTGGATATTAAGCGAGAGGCAAGCCAGCGGAGGAAGCTAGACGAGGAGCTATATCAGCTCTCCTCAACAGGGGAAACAGACAATCTTAAAACCATGGTAACAAAGTTACaagaggaaaacaaaaaactgaGAATGCAATATGAAGTAACAACTAGTACCCAACCAGctACAGCTTATATAAGTGCGCCAGGTGATGCCGAGTTGATGCGCAAGATGAAGGAGACAATAGATAATCAAAGGGACACCATACGAAGTAAAAATATGGAGATTGAGAGCTTGAGAAATGACCTGCAAGCGGTTGAAGAGCAAATTGAACGACTGACCACCATCAACGAGAGCGTTCGAAAAACCCTGGGAGCTAGTAAGGATCGAATACACGCTTTAGCCAAAGAAAAGGCGGAGCTGCAAACAGAACTGCGCGTGCTCAGACATAAAGATGAGACGCCGCTGCAAAGCGACGAGAGTGGTGCTGAGGATATAGAGGGGTTTATGGATAGCTCCAGTGAACAACAGGACGCCGAAGgagaggaagaagaagtggGAGTTGACGAGGAAACAGTGCAAAATTCTGAGGGAAACACCGAAGACATGGCAGCTCTAAGCAATCGGAAGCCTCCGCCAAAGCCACCACGACTGCAACTTGAAGGCGGAGAAAACGCGGATGATTTAAGcaataatgaaaataatgtCGGACATAACGAGACGAAGGTAATAGAGGTTGgtaaagaaaaggaaatcaTGGTAGGGCAGAATGGAAACGATGAGGAAGAGGAAGACAATGGTGACTGGGAGATTGTTGGGAGGGTGACGAAAACGGCGTACAACAGAGAAACATCGCGCaaggaacaaaaagaaatacGCGCAGAAAATCAACGACAGGGACGAgcagataaagaaaataaagatcCAAACCGGCCTCGATATACCAAAGCAGAGATGTTGGAGATTTTAACTGAAAGGAACGACTTGAAGGAAAAAGTTTTCGCTTTACAAGACGAGCTCAGAATTTACAAACCCGGGTATGCTGAAGTGGACGAATATGGCCATTCATCAAGAAAAAGGTCTTCACCCAGAGTGACACCAAGGAAAGAAGAGTCTGGGATATCGAAAATttTCAGCATATTTACTCGGAAAGGAGACCACTGATTCTTCAATCGAAGTTGACAACCAGATTTTGACAGGACTGACTGTGCGTGAGAGATGAAGCCTTGGAGCATTGAAGGATATCGTCTCCTAAGGATTGCACAAATAATGGTCAGCATGTATTTAACGAACGGTTGCTGTTGAAGGTGTCGGACTGGACAGACAGTGATCTCCGATTATTTCTCTAAAAATCAAAGTTGTACGTCTAAACACGAACACTCTCCGAAGGCTGTACGAAGAAGCGCGCTGACTTAAAAACGATATCGCGGGCTCTCCCCTTCCTTAAGAATAACTGTAGCTGGTTTGCGATTTCAAGGCTGAATGTTCGATTGTATAATCCTATAACTAAATCTATATTGTTGGCTCGTTCCGTATTTTACAACAAAGAGGGGCAGGCATTAGATAGCTTGCTTTTAATTCGTACTAAGAGCAAGGGCTGTTTTTGGCAGAGCGCCCGAAGATTTTCCGACTGCTTTATCCAATCTAAACGTCTAAGCAAACGGAGAAACAGAAATCTGACGGAAATAATCACAAATTTATCGAGATAAACCTATGTACATTTTCAAGAACATCCGCAACTATGGTTAATTATTGAACTGGTTATTGATTTTGCGATGaagataatattttattaaacTTGGTGATTTTTACAATGAACGAATAGAGTTTTACACAACCGAGAAAAACTTTTAGTCTAAAttttctaattgttttagcacaATATTTTTGTAGAACAACGAATCCCTTTTGCAGTTGTGCACGAATTGTCGATGACTTTTTAGACTTATTGCAAAACTTAAGTTTGTAAAGTGTGGTTTTGTATTTGTTGTTTTAGCTTTGTAAGTAAAAGTTCTATTGACTCGTCAATCATTTTTTCTGGTTCCAGTTGCGTCACAACCTTCTATGTACGTAGTTTGGATCTCCGGATTTTTACTTTTGTAGAGAGAATATAATCGGTTTATGTGTGTGAAGGTTAGCTACCGATACCAACAAAAGCCGGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q17QG3	RILP-like protein 1 OS=Bos taurus OX=9913 GN=RILPL1 PE=2 SV=1
Q5EBL4	RILP-like protein 1 OS=Homo sapiens OX=9606 GN=RILPL1 PE=1 SV=1
D3ZUQ0	RILP-like protein 1 OS=Rattus norvegicus OX=10116 GN=Rilpl1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006566 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09744 all species →	Jnk-SapK_ap_N	JNK_SAPK-associated protein-1	Family	Interproscan
PF11461 all species →	RILP	Rab interacting lysosomal protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019143 all species →	Domain	JNK/Rab-associated protein-1, N-terminal	Interproscan
IPR034744 all species →	Domain	RH2 domain	Interproscan
IPR021563 all species →	Domain	Rab interacting lysosomal protein, dimerization domain	Interproscan
IPR051241 all species →	Family	DZIP and RILPL	Interproscan
IPR034743 all species →	Domain	RH1 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21502 all species →	ZINC FINGER PROTEIN DZIP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20173	RILPL1; RILP-like protein 1	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.