Gene detail

Detailed information of ENSAVKP00000046956.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: XP_029210575.2, uncharacterized protein LOC114974519 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAVKT00000050914

CAGCGAAGCTACCGTACTCAGCATAATGGGTGTGACCCGTCCAACCTTTTTGTAAAGGCAATGAACGATGTTAGGGTGGGAGGACTAAGCATtcgaaaatcagccaaaaaGTGGGGGATTAAAAGGACCACTCTTCAAGATCGCTTGAGTGGTCTGGTTGAGATCAACAGACGCAGAGGCCCACCTCCAATTCTAACAAAGCAGGAAGAAAACCAGTTCACAGATTGGCTAATTGTAATGGCAAACCGGGGTTTCGGTGTGTCTAAAGAGAGTTTACTTAACACGGTCAAAACATTCCTTGACAAAGACGGAAGAAAAACCCCTTTTCAAGACAACAAACCTGGGAACAAGTGGTTTCGCTCTTTTGTTAAGCGAAACCCTCGGGTAAAATTACGAAAGTCACGACCTCTTGAAAAGAAAAGGGCTAAGATCTCGAAAGAAGATTTGGACGCCTGGTTTAATGGCTTCGAAAAGTTTTTGGTTGAAAAAAACCTCGCAGATAAGCCGTCGCAAATCTGGAACTGTGATGAGACCGGTTTCGATATGCAAGGACGAGCAGGAAACGTCATTGGCCCATCTGACAGAAAAGAAGCGCCGTTTAGCGTCCTTCCGGGAAGCCGAGAGCATGTTACTGCGTTACCTTGTTTTAACGCATGCGGCCAGTGGATACCCCCATATTTCCTTTTTCCTGGAAAGCGCATTCCCGTTACTTACAATCCGCTAGAAGGAGGCGTCGAAGGAAGTGTCTTTTCTATGACAGAGTCTGGTTATATGGACACGTCAACATTTTATATGTGGTTTGCAAATCACTTCATACCAAATTTGCCACCAGCAAGGCCTGTTGTCTTACTTGTTGACGGTCATGATTCACATCTTAATCTCGAGTTATTCCAACTAGCAGAAAAGAATGGAATCTATCTGTATTCTCTTTTACAAAATGCGACACATCTCGTTCAGCCCGCTGATGTCGGTCTATTCGGTCCAATGAAAAAGAGTTGGTACAAAGAAGTACGACTGTTTGCTCAAAGAAACCCAAACACAGACATCAATAAGAAAAACTTTTGCTCAGTGTTCAAAGCAACATGGGAAGAAGTTATGAGCCCATCAGTTCTAGTCAGCGCCTTTCGTAAATCGGGTATTTACCCTTTGGACAGGAAGCAGATTTCAAACGAGCAACTGCTTTGCTCTGAGCAATCTTCTTCCGAGACAGGTTCTCCTCAACCAACACTCTCAAGTAAGAGCTCATCAGGCGCAGTGCAAGCTTTTGAAGCTCTAGAAGCAGTCTTGACGACCCCTTCCAGGACCAAATACAGACGAAGGATGGCAGAGGGCTATGATCTTGAAGGAAGTCCAACCTTTTCTGTTTGGCAGAAGCTGTACCGCGCAACAGAGGATCCAGTCATACCAAGCGAAGCCAACCCGCAAGGTACAACAGCAGCGTGTACAACAACTACAACACCTTCAACAAGTACTGCCTCTACAGCAAGTGCGCCTTTAAATACCACGGCATCTTTGACAAGTGCAGCGCCTTTAACAAGTGAGAAACGTAGAGCAGGTACTGAGCCAGCTTCGTGCCAGTCTCGCTCCACGGAAAAGGTGCTCCGAGAGATTTTAACCTTTCCCACTCTTGAGGCAAGCGGTCCtccaaaatgtaaaaatgtcAAAAGAAGTATTCCAAATTTTGTGAGTGGCCCTGAGTCAATGCAAATTTTACTTGATGAGAAACTAAAAAAAGCAAGACAACTCGCAGAAAAGCAAAAGAAGTTACAAGAAAGGGAAAATAAGAAGGAAGAGAGACGCAAGAAACAAGAGGAAgagaaattaaacaaagaaaaaagaaaaaaggaaagagctgacaggaagaagaaagatcaCGGAACCTCTGGGAGTAAGAGAGCAAggaagtcagtcagtcagagtCAAGCAAGTAGAGGAAAAAAATGGCGACAAAATTTGGTGGAGAATGAAGAAAATCTCTGTAGCATCTGCCTCCAGGAGTATCTTTCCACTGATGGCGAAAACAACCCTTGGGTCCTTTGCGACGGTTGTAACTTTTGGATGCACATAAACTGTCTTCCTCTCGGAGTCGATATTTCGAGTATTTATAGTAATGAAGACTTTTTCTGCCATGTATGTTCTGGTTAA

Transcript

ENSAVKT00000050914

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	HTH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00628	PHD	PHD-finger	Domain	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF05225	HTH_psq	helix-turn-helix, Psq domain	Domain	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR007889	Domain	DNA binding HTH domain, Psq-type	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02309	DBF4; regulatory subunit for Cdc7p protein kinase	-	DNA replication proteins	ko03032	deepkoala