Gene detail

Detailed information of ENSAVKP00000048846.1 in Catalaphyllia jardinei

Genomic Location: :...
NR annotation: CAH3163599.1, unnamed protein product, partial [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAVKT00000053212

ATGGGATACACTGTGTTGCACAGACTAACTGACGTCGACGACACGTGGAAAGCAAATGGTATCCGAGGAGGTTGGGACAATAGTTACACAATCACAGGATTGAAGCCTAATAAAAACTATTCCGTTCGCACTCTGCCGTATTCATTTCAAGCCGCCGGATTAACAGGACCTACTATTATTGGTGAAACAAAGGAAGATGGCAAGTCAGCGTTTTATAGTTCCtcgtttattttttgtttcttctcaACTAGCCAACTAAACAACCAAAACTCCAATGTCTTTTCTTTAGTACCTTCCACTGGTCCGGTCATCTTAGAAGTCTATAGCATTAACACGACAGCTGTGTTTGTGCGATGGAACAAAACCAGCATCCCAAACGAGAAATGGAACGGGATTCCTCTTGGATTCCGAGTGCACGGACAGGGACAACCTTGCACTGGGTTCCTCGTGACTCCTCGTAACGTAGCACTTAACGTCTCGACATTTGTAGTGACTGGTCTGAAGGCTTGGGCAGTTTATGTTGTCAAAATTAGTGGAGTAACAAGACCAGGACATGGCAATGCCTCTGAAGTTAGAATAAGAACCAAAGATTCAGTTCCTAGCCGTAGTCCAGAAAACATTAGAATCATCAGAACAAGTAATCACAGCGTAAAGGTCGAATGGGACAAAGTAAACATCTGTTTCCTGCACGGAACTGCCGTGTCATATGAAGTACATTTTCGCGACGTACAAGGTGGGAGCACGGACTTGATGCACAACGTAACTGTTCTCGTGGAAGAAGACCGGAGACTTGATTTCACCAACTTAACGATCTACTGGATGTACGGAGTCCGCATCAAGGCTTTTACAATAAAAGGACCCGGGCCATTGAGTCCAGAAATAACAGGCATGACTGATGAATGGGGTATGACACTTACTCAGTCGTTACGAGTAGTCTTAGATACGagcgggaaaaaatggcgggaaaacGCGCGTGTGcacatttggcgcaaaaatcgAAACAAATTACAGAGTGAGACAACAAGGCAGGCTTGTATAACAGGATTGGATGTCTACAGATTTTATAAGATTTCTATTGCTGGGAAAACGAGAATAGGACACGGAGTGATCAGTGAAGACGTTTATGTGCGTACTTCCGGCACAGCATATCTGGCACTGTTCAACACAAGCTCCATCGCTTTGAGAGCAGTATGGGACCAGGTTGCTGATTGCTGTCGTCATGGTATCATTCTTGGTTATCGACTCTTTTTGAAGGATAACAACACTGGGGAATTTGTAAGGAATGAAACGACGGCGGCCGACCAATATGAGTTCGAATTTTCGCCTCTGCTTAAATATTACGGCTACAGCGTCTATATCTTGGCATTTACCATTAAAGGAGACGGCCCGTTCATTGAAGCATGCAGACTGAGTATTTTTCCGTTTTTTACACAAATcacgatgttttttttttcagttccaaCATGGAGGCCGGCAGGTATCGCCGCGTGGAATACAAGTTCTACCTCTGTATTGTTGTCATGGAAACCACTAGCCGATCCGTATTACCTCCACGGCATACTTCGTGGTTACGTCATTACGTATAATAGAGTGGATGGCGTGTTACCTGCTGAACATGTAAGCACGTGCAATTCAAGCCTCTCCCTGGAGTTAGATGGTTTGGATGAATACGTTGAGTATCGATTTGAAGTTCGAGCTTTTACGATAAAGGGTGAAGGGCCCTTCACTAACATCAGCTGTCTGACGGATCAAGATGTGCCCGCAGCACCACCTCAAAATGTCTCTGGCTTCAACATCAGCAAGCATGACATCCGGGTCTTTTGGGAGGAAGTTCCTTCTCGTGACGTCAATGGCATTTTGCTTGGATATCGATTTCTAAAGCCTTACACCTTCTACTCAATACAAGTACTAGCATATACCCCAAAAGGAGATGGGTCGAAGAGTCATCCAATCGTAATCAGAACAGAAGAAGAAGCTCCCCAGGTTTACCCCTGGAATGTGACCGGCCAGAACTCCAGCTCCACGTCCATATACCTGCAGTGGTCCGCAATTCCCGCGGAATTAGTTGCCGGAGTTTTACGAGAGTACAGAATTGCTTACGGCGAGTTCAACAATCGTAATGAATCCGTTAAGAGGCATCTGTTGAGGTTGCCACTGGACCAGTTGTCCGTAAATCTGACAGACCTAGAAAAGTATACAAACTATAGTTTTGAACTGCAAGGAATAAGCAAATTTTTCGGTGTGAGCAGTCCACCCATTGTTATCATCACAGATCAGGATGTGCCAAGCAGTGCCCCAGGAAATATCACCTCGACCAATACAAGCTCTACAAGCCTTCTAATAACATGGGAACACATTCCAAAGAAATTTGTTAATGGGATTCTGCTCGGTTACCGCGTGTTTTACCATCAAGCTATTGATACAGTAAAAGAAACCATTGAGACATTGCCACCAAACGCGACATTTCTCAGGATATTCAACCTCACAAAGTTCACCAATTATTCCTTCAGGATCGTTGGTTTCACGAGCAAAGGAGAAGGGAAGATGAGTCAGACTTTCAACGTGTCCACAGACGAGGATAGTAAGTTGTTGTTTGATACGTTAATCCCGGAAGGCTTTGTACATGGCATTCTCTTGGGATATCGCATCTTCTACACAGTTATAAGCACAGCTGGAGCTGAGGATGTAAGAAAACTGACTCTGAATAGGACAACAACTGCAACAGTCTTGAGTGATTTACTGAACTATGCCGTTTATGAAATAAAAGTGACAGCATTCACTGTGAAGGGTGATGGAACCATCAGCGATGAAACTTGCAGATGCCCATCAAAAATGACGACAAACTGGTATTCCTTCCCTCCATACATGAGCCGGGAAGGCAGTTCATATGTGGGACCTTTTCCATTTATACTGAACTGGGCAACGAGACGATGCTGTAAGCCATGCCTCAATGGCCACGGACCCACTTCGGTCGATTATGAGCATGACAGAGGGAACATGACCGCTGAGAAAGACAACGTGTCGCTGGTGTATAAGATTGTGCACGAAGCAGACTTAAGCTTTCCAGTAGAGGGGTACAAAGGTCAGTCTAGATACGGAGTTTATCGTTATGTACCCCTGGTAGAATCAGCTGGGGTGGCTCTCGTCGCACCGTTACCTTCAGCAGAAGAGAAAGCTAATACTGTGATACGTGTTGGCACCGCTTGTTTCCCGATGCTGCTTCTAACATTATTGATGGTACTGCTGGCCGGCGCGGTCTTGTGGGCACTAGAATCTGGTGCCAATCCCGAGGAATTTCCAAACTTATTCACTCAAGGATTATGGGCAGGTTTTTGGTGGGCTTACATCACGTggttttcttttattttcacaGATCAGCGGTATCACACATACAGAGAGATCAACACAGCGTTGATGAACAAAGAAGTAGAAGGTGCTCTTATCGACTTGTCCGTTGTGTCTACCCACAAGGATCTGTCCTCCAATCCTACTCTGCGGGTGTTCAAGGTGTACGACTATCAAAAGACTTACGGAGTGGTGTTGACAGAGGTCTCTATGAAGTTAGAGAACTGCTTCCTTGACTTTACTTACGACGACTCCATCTCAGAGGATCCTGTCCAGGATGTGGGCGGTGGACTTTTTGACCCCAGCGCTTACCAGTTCCGTTTGAGTGTTTTCTTTCTGTTGGCTCTCACTGCTGTGTTTGCTCTTTGTGGATTGGTCTACCATATACACTGGACATTAAAACGACGTTCAAATAGCATAGGCAAGTAG

Transcript

ENSAVKT00000053212

Protein

Uniprot

Uniprot term	Description
P0C5E4	Phosphatidylinositol phosphatase PTPRQ OS=Mus musculus OX=10090 GN=Ptprq PE=1 SV=1
Q8AV58	Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV=1
O88488	Phosphatidylinositol phosphatase PTPRQ OS=Rattus norvegicus OX=10116 GN=Ptprq PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16353	SDK; protein sidekick	-	Cell adhesion molecules	ko04515	deepkoala