Gene detail

Detailed information of ENSBQFP00000001393.1 in Heliopora coerulea

Genomic Location: :...
NR annotation: CAB4020416.1, rho guanine nucleotide exchange factor 4, partial [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSBQFT00000001625

ATGAGTGCCTCACCTAATAAAGCAAAGAGAGCACGGAGAGTAGACCATGTTAGTCGACCGACCATGTCAATGTCGTCCACAAACGAAGCTGAAACTATAATAGATTCAAGCGGAAACAGATGGAAACGACGTCTTCATTCGTTACGACTGAGTTTGACTAGAAGAAGAATTCACAGCTTTATAGAGTCTGATACagcaaaagaacaaaataatccTCCCGAGTACCCTTTGGGGCAACGACAAACAGAAAATACTGGTGTTGCTGATGTTTGTTTCGATAATCGATATCAGTCATTTTCATCCAACAACCGTGGTCAGACTTACAATGGGAAAGGTTCTCCGTCGAACCTCAACTGTAAATCAAAAGATGTCACCGTTTTGGATCATGTCACTGCATCCAGTAATAGGGCTAGtgttaagaaaagaaaaggactCGGTCGCCACACAAAAGACGGCACTCTGTGTGACAACAAGAACCGCGATACTTCACAACGGAACATGccaaatgatgaaaacaaaTCAGTCGGCAGACTGGGCAAGCCACATAACGATGGGAACCGGCGGAGAAATCGATTTGGTAGGAAAAACGCGAAAAATATGTTGGCATTTCCTAGCTGGTTCAGGTCGCTAGGTCGGTCTTCAGCTGCGAAGAATTCCAAGCACATTTCGAGAGATTTGTCCCTATCAGCTGGCAACTTTAACGAAGAAGAACGAAATTTTAAATTGCTTACTGATGTGCAGCTTTTGAGAGACCCGGGGTACGTCTCAAGCTCAGGAGACTCCCTTGATCGTGAAAATGAAGATTTTCATGAAAGTAAGTACCAGTCGCTTCGCCGTTCCAGAGCGTCCTTAATTGATATCAGGTGGCATAAACACGGCCATAGCGAAGGTAACCTTGCGAGTCCCAAAGATACCATATCCAGGAACAAAAGTCCATTGCTTAAAACAAGCTGTAAAAAAAAAGATTGTCTTCCGGACGAGTCTCGATTTGAACAAAATAGACAAGAAAGATCTTGTCATAAGTCaaaaagctgttcaaaacataCTGAAGTAGAAGATGTTTATTTGACTGCCGATGAAGATACAAATGAACAGGGGGAATTTAAGCTGTGTGAAGAATCAGAACACACACATGTAAAATTGACAAAGAAAGCCAGCCCAGTTAATTCTAGAGAGAAAAGGCTTCCTGACTCTGTTTCTCATGAGATGGTTCTCCATTTGTCAAATCATAATTCctcaagaaaagaaagaagtgTCTCATGGGTCAATCTGCCAGTGGCTGTATTAACAGATGtcaatggaaatttaaaacaacttgaTAAATTGGAAGAGCCCCATATTTTACACATGAAACAGAGTGAAAATACAGTTAACAATTTACAACCATGTTTATCTAAGGTACccaaaaatttatcaaagaGTCAACCTCTGAAGACTTTACCTAGTAGCCAAAATGAAGTTCTTGACACTTACTTAAATGCAGATGTTACAACTTCTGTTAGTGcattagataaaaataatgCCACTAGCTGGAAAGGAGCTACTGACATGTGCCAAAATTGTCAAGCTGAAACAGGTGGAGTAGGAGTGAGAGGTGTTCAATGGAATTTATGCAAGTTTCCATCAGGACATCTTAATGACAATCATGGTCATCAGACACCATACATGTATTGTCAACGTTGTAAGTCTTCAACAAGGGGTCAATCTCGAACAGACATGTATCATGATCTAGTTTTTATCAGACCACCAAAGAAGCCTGCCCCAAAGCCTCCATCTCTGATAAGAAACAGATGCCAGAGTCTAATAACACTTAGTGATGAGTCTCCTGTTTTATCTGAGCAGTTGTCTCTTAATGAAACATCTTCTGTTCATAAACTCAATGATTCCTGTGGTGAAAATTTATATGAGCTGATGTCGCAGTCCAAAGGCAAGTCACAGACTAGTGAGGGGGTATATGTTGGTATTTCAGGAGACCAAGGTGTCATTCTTAGGAAAAAGAGAGTCTTACCAAACCCACGTGCTGTGTCAATGCCTGTGGAACTGTTAGGGCATGTAATTAAGGAGGCTCAAGGGACAGAAACACCTAACCTGTCAAGTGCTGATGGAAGTATTTCAGAATTAAGCAATGAACATGTATCCCCATCACTAAGTTCAGGAAGTGATGTTTATTTAAGCTGCAACTCAAATTCTCCATCACCTGTTGTTACAAATagtaaagaaaaagaatgtTGTACAAGGTTATTGAGTATTTCTAGCATTGAGGTTCATGAACTAAGTGTGCAGAAAAAAGCCAATTCCCGAAGTGTTCCAtgtttggttttaaaaaaagATTGTGTTGATAGTTTGAAGTCAATAGAAGGTGACCACAGTATGAAGAGAAACTTTGCACTTTCAAGTGAAAACTGTTTTATGGAAGGTCACACAGATTGTTGCAGTAACTCTTCTAGACCCCAAAGCATGATTTCATTGAATCACAGAGAAATATCTAATGGAGATGGAGACACAAATGAAAAGGTTAATGGTAAACCATTGATGTATGCAGAAGCATTATGGGACCATGTCACAATGAATGAGGAAGAGTTGTGCTTTACTGCTGGCCAAGCTATCgcagtttatgattttgatGACCCGGAGTGGTGGTTTGGTCTGGTTGAAGAACATATTGGATGGTTTCCTGCATCATTCGTGAGGACATTAGCTACACGAAAGTCCACATATCGTTCAGTTTTTATACTGTAA

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9NR80	Rho guanine nucleotide exchange factor 4 OS=Homo sapiens OX=9606 GN=ARHGEF4 PE=1 SV=3
Q96N96	Spermatogenesis-associated protein 13 OS=Homo sapiens OX=9606 GN=SPATA13 PE=1 SV=1
Q5DU57	Spermatogenesis-associated protein 13 OS=Mus musculus OX=10090 GN=Spata13 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07653	SH3_2	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47544	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan