Gene detail

Detailed information of ENSBQFP00000009131.1 in Heliopora coerulea

Genomic Location: :...
NR annotation: CAB4025430.1, collagen alpha-1(XI) chain-like [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSBQFT00000010171

atggagcACTCGTCGTTCAATGTCAACTCCAATCACGGCTTTGGACCAGTTCCTGAAAAACGACAAAAGCGGGCTGCGTTTGTTTCTGCTTCTCTTTCATTTGTCATTATGGTCATCTTGCTTGGCGCCTTCACTCAACCTCGTAAAGTCGAGTACAGTCCTTTAACCTCGAACATATCACATTCTCCAGTGCTTTGCAAAGCAAAAGCTGAATATTACCACATTGGGATTTTTATCTGGGCTCTCAACCTCGTCGGCATAATTGTCGGGGAATTCATGAACAGATTTTGCCTAATGTTCGAGGAGTACTTTCATCTTTACACCCGATACAACGGCAGCAAAACAAAAATGGTTGTGGCTTGTTTCAATGATATTTCTCTCAAAGCAGTCCTCTTCGGCAGTCTTGTGGCGTTCATCATTATAAGTTCAACGTTGCTTTCCCAAGGTGCAGAATATTTCAGGTTGGAATACATAGAGATTATCCTGAGCGGTATTGGCAGTGGATCACTTGTGATCTATCTATTGAGCCTAGACACTTTATCCCGGGTGCAAATTTCCTCGCTAATGGAGAACAACAACCGTTTGGTCGCGAACGGTTTGGCTTGGTCATACTATTTCGGCTACTTAAAAATCATTCTTCCAGGTCTTCAGAATCGTATTGCTGAATCACCTTGGGCTCAAAAACTCTCTTCCAAAAAGCTTTTCATTCTAATGCCGCGCGATTGCTATGCGTACGGTAACCTACACGACGAAGACGAAATGATTGAGGTAGTCGAAGATGGTTCGATTGAATACGAGGTTGAACGAGCTGGTATCTTTAAACGGTCATACCGAAACATAGTATACACAGTGAGAACTGGTACCGAGAGTCTTTATGTTCTTGCAGAATATGCGACACCGCTGTGCTCTATGTATGACATGAGTCATTCGGCCAGCGCTAATCTCAGCTTGGAAGACCGTGATGAGCAAGCGAAGCTGTTTCTGCGGACAGTGGAAGCGATTCTGGAGGACCCATGTGTGCCAGAAGTCCGTAATAAATGCAAACTTGTTCCGTACGGCAGAGGAGATGGATTAAAACTTTCTCAAGTCTTAGCCGAAGCTGTAACGGAAGAACAAAAGTTTGCCACTGGCGTTGGGGAAGGACAGAGCGTTGAACAACAAGCTGAAGAGATGGATACAGTACCAAGCTTGTTTTTTGGCCTTTTGGTGTGGTGTACACTGACCCAAAGCAGAGGAGACGGCACAAAGAAGCTTGAGAGTATAAAGGCTGAACTAAAACAACTTGGAGGAGACAAATGTGATGCGTTACTTAACTCGTTCGTGAAATACGGTAGTGCGTTGTGCAGTTGCAAAAATGGAGAAAACGGAAGGAATGGGCTCAATGGAAAAGATGGTGCAAGGGGACTTCCAGGACCTGCAGGACCGCCAGGACCTCAAGGAATCATGGGACACCCAGGAAAGCAAGGACCTGCGGGGATCGGACCGGGAAGTACTCTACGTCTCGGAGAGTCTTACGCCATCTGTGACATGTATACCGCGGGTACTATTCGTTACAACAGGACATTTAGAGTGGTGCAGTTATGTAATGGTGAACAATGGTTGACAATGACCCTAGAAACCAAAGGAAGATTGAAACATCAACCTGGAAAGTCATGTCAGGATATTCTGGACTCAGGTCTTAGCCATGGCAGTGATCTGTATTGGATTGACCCAAACGGAGGTTCACCTGACGACTCATTTCAGGCGTTTTGCGACATGACTACAGACGGTGGTGGCTGGACCCTGGTTTCTACGAAAAAATCCCGTAATGTCAAATTGATTTGCCAGAAATTTTACGAAAAAGCTGCCTCAACGTTGCACAGCGACTATTGCAGTCATATCCATCCGGATATGAACGATTGGAAAGAAGTCATGTTCCGTTTTAACGACGACAGCAACATACGGGTCATTTACAGCCGCGAAGGTGGAAGTCCTGGGCAAGGGAAGAATGATTTTGCAAATTTCCTCATGGGTAAAGTGATTGAAACTTCAAACTCTGGTGTAAAGGTAGATGGCTTCTACAAGTTTAGCCCCTCCGTAAATATGGGCAGACGAACGCCGTCAGTTTTCTTCTATTCCATCAACGCCCTGGTCTTCAAGTCCTCGGAAGGCAGTGTGAGTGAACACTTCTCAGCCACAGATAAATGGTTGAACTTGTGGAATTCACAAGACGACACGAATTACTACCTCTACGCTGATGATAACAGCTGTGTTGGTCAGAAGTGTATCGCGGGCTATTGCGCTATGCATACGCCGGTTTGGTTGATGGTCCGCTGA

Transcript

Protein

Uniprot

Uniprot term	Description
A0A2B4SJA1	Stimulator of interferon genes protein 2 OS=Stylophora pistillata OX=50429 GN=STING2 PE=3 SV=1
A0A2B4SES9	Stimulator of interferon genes protein 3 OS=Stylophora pistillata OX=50429 GN=STING3 PE=1 SV=1
A0A2B4SJD2	Stimulator of interferon genes protein 1 OS=Stylophora pistillata OX=50429 GN=STING1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan
PF15009	TMEM173	Transmembrane protein 173	Family	Interproscan
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR029158	Family	Stimulator of interferon genes protein	Interproscan
IPR038623	Homologous_superfamily	Stimulator of interferon genes protein, C-terminal domain superfamily	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34339	STIMULATOR OF INTERFERON GENES PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan
GO:0000045	Biological Process	autophagosome assembly	Interproscan
GO:0002218	Biological Process	activation of innate immune response	Interproscan
GO:0005776	Cellular Component	autophagosome	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0016239	Biological Process	positive regulation of macroautophagy	Interproscan
GO:0032481	Biological Process	positive regulation of type I interferon production	Interproscan
GO:0035438	Molecular Function	cyclic-di-GMP binding	Interproscan
GO:0045087	Biological Process	innate immune response	Interproscan
GO:0061507	Molecular Function	2',3'-cyclic GMP-AMP binding	Interproscan
GO:0061709	Biological Process	reticulophagy	Interproscan