Gene detail

Detailed information of ENSBQFP00000015522.1 in Heliopora coerulea

Genomic Location: not available for this species
NR annotation: XP_028394633.1, protein SMG7-like [Dendronephthya gigantea]
Species abbreviation HCOER · all data for this species · gene families

Sequence

CDS

ENSBQFT00000017304

ATGGCGCCGGTTGTTTTCAACTCGTCACAAGTGTTTCGCGAAGCGGAAGTGTTGAAGACCACCATCTCTGCTAAGAGGAAAGATGATTTTTCTGTTGGAGGAGAGTTGTGGTCTTCCTGCCAGAGCTTGCAAGACCTGTACAAATCCTTGCTGCTTAGTGATTTAAGTTATGCATTGGAAAAGAAAGTTGAACAAGAACTgtGGAACAGTGCTTTTAAGAGCCACATTGACAACATGAGACAGCAAATGAAAGACAAGAAGGGCAACAAGAAAGCTGAACTTCAAACATTATTCATGCTTTTTCTTGAAACTGCCAGTGGATTTTACATTCAGCTTCTAAATGAACTGTGCATGAAGTATACCCTTGAGGTACCTGGCTACATAAATCCTGCAGCACTTGGAATCTTACATGatgTAAACAGCAACAAAAAGACTGTAAAAAAGCCATCGTCTAGTGCTTGTTATTACATCTGTCAAGATTGTTTGGTGCATCTAGGGGATCTTGCTCGTTATAGGAATGAAACAGTGGAGGCAGAACTATATTACAAGCAAGCTTTGCAACTTGTCCCTACTAATGGTCAACCTTACAACCAACTGGCCATTCTAGCTAGCTCTAGAGGGGACACACTCGGCACTGTTTACTTCTATTCTAGAAGTATTGCTGTGAAAAATCCATTTCCTGCTGCATCAACCAATCTTACTAAAACCTTTAGCAAAGCTTGTCAGACAGCCAACAGCTCGCCACCTGTTGGGAAGATGTCCAAGGCCGAATTTATTCAACTGTTTGTCCAGTTTCATGGATGCATTTATCTTGCACAAGATCTAAACGTCGCTAAAGCTTTGATAGAGAGGACTGCCAGTGAACTGAAGGGCTTGCTTGAATCGGATGATCTAACTGCCGGTGATCTGGTCAAACTTGTTGCCATCAACCTCTTCCTGGTACACCATATTCAGTCCAATGCTTACGAGGATGTGGACGATTTTGACAGCTTTGGAAAAGATGATCAGCGCGAATCGTGGAATGTTGCCTTGGAACTCACAATGAAACTGCTGGAGTGTTTTCTGGGAAGGATTGTGCAGTATGAACTTGAAGTCAAGAATGCAGAATATCCCTCCTATGTCAGCGGTATTTATCCTGCCCTTCAAGTGATTTGCCAGTGGTTAAAGGCCAATACTTTAAGTGTCTGCAAAGATAATGTCGTCGTTAACCACCCTCGgCTTTGGGTGGATTTTGTTGACTTGCTGAATGGATTTGTCTTTGAAAATAACCCTGAAAAGTCAGATATTGCATTACCCGAAGATCAAGAACTTCAAGGATTTCTTCCTTTGCAAAGCGTCCATAGGAAATTGGATTTTGCTTCAAACCGAAACTCCAAGAAGGAAGAACAACAAGAACGGAAGAACAGGCTCTTGCAATTTGGACTTTCTTTATCCCGTCATATCAGTGGGGTCGTATCATGTCAAAAGAGGGAGAACGGATATTACAGGTTTTCATGCGCAATGGATACCAATGGATCCAGGGGTACAAATACACCCTTTTCTGAAACCAGTTCCTTATTTGGTAATTCAAATGACACCCAACGTATCCATTCTGAACCACAATCACCAGTTCACAATCAAGTTGGACAATATTCCTTGTTCCAATCTGGTTGGAATGTTCCCTTAACGGTTGGCAGTACAGTATCCAGTGCTGTGCCTTCCTCCCCTTCTCCTGCATCCTCATCTCATCCATCAAAACCCTCAACAATAGTAAACAATATTCAAGATTCAGGTACACTCGTCACTTCTCGTGCAGTCGGCAGCCACCGTAGCCCTACGCTGTCTAACCCAGCACAAACTCTCCCAGTACCTCCTACTTCTCTCGCGGTTGGCAGCAACCGTCCACTCTCTCCAGGCAGTCGCATTACGCCATCCCCTAATGGAGAAGCAAACCAGTTCCCAACACCAACCAGTTTTGGCATAAATATCGGTGCTGGCGTGTGGTCTCCGTTGGCCAATACAGTTGGTAGTGTGCATCCTGAGGGAGGTGGTAAAACACAAGCCAACGGGACTGGAAGTTCTATCTGGGGGTCAGGTTTTCATCCTGCTCAAAGTAACATGTCCCCCCTGGAACAGCTGCTGAAGGAGCAAAAAAGCCAGCAGAACTCGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RJH6	Nonsense-mediated mRNA decay factor SMG7 OS=Mus musculus OX=10090 GN=Smg7 PE=2 SV=1
Q92540	Nonsense-mediated mRNA decay factor SMG7 OS=Homo sapiens OX=9606 GN=SMG7 PE=1 SV=2
Q1LVF3	Nonsense-mediated mRNA decay factor SMG7 OS=Danio rerio OX=7955 GN=smg7 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005735 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10373 all species →	EST1_DNA_bind	Est1 DNA/RNA binding domain	Repeat	Interproscan
PF10374 all species →	EST1	Telomerase activating protein Est1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045153 all species →	Family	Est1/Ebs1-like	Interproscan
IPR018834 all species →	Domain	DNA/RNA-binding domain, Est1-type	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019458 all species →	Domain	Telomerase activating protein Est1-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15696 all species →	SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000184 all species →	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0005697 all species →	Cellular Component	telomerase holoenzyme complex	Interproscan
GO:0042162 all species →	Molecular Function	telomeric DNA binding	Interproscan
GO:0070034 all species →	Molecular Function	telomerase RNA binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSBQFP00000015522.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.