Detailed information of ENSBQFP00000024924.1 in Heliopora coerulea

Genomic Location: not available for this species
NR annotation: XP_028394282.1, rootletin-like [Dendronephthya gigantea]
Species Heliopora coerulea · all data for this species · gene families

 Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8CJ40Rootletin OS=Mus musculus OX=10090 GN=Crocc PE=1 SV=2
Q5TZA2Rootletin OS=Homo sapiens OX=9606 GN=CROCC PE=1 SV=2
Q9BV73Centrosome-associated protein CEP250 OS=Homo sapiens OX=9606 GN=CEP250 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002685 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15035
all species →
RootletinCiliary rootlet component, centrosome cohesionFamilyInterproscan

 InterPro
No InterPro signature was detected for ENSBQFP00000024924.1. This gene does have a gene model — the search simply returned no hit.
 PANTHER
PANTHER termDescriptionSource
PTHR23159
all species →
CENTROSOMAL PROTEIN 2Interproscan

 Gene Ontology
No Gene Ontology signature was detected for ENSBQFP00000024924.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16469CROCC; rootletin-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of ENSBQFP00000024924.1 across 37 RNA-seq samples of Heliopora coerulea. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

37Samples
0TPM > 0
6Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
Whole coral 17 0 0.00 0.00
polyp and skeleton · 31C, 3week 6 0 0.00 0.00
polyp and skeleton · 28C, 3week 6 0 0.00 0.00
polyp and skeleton · 26C, 3week 4 0 0.00 0.00
polyp and skeleton · 28C, 24hr 2 0 0.00 0.00
polyp and skeleton · 31C, 24hr 2 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (HCOER_TPM, StringTie quantification over 37 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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