Gene detail

Detailed information of ENSBQFP00000047702.1 in Heliopora coerulea

Genomic Location: :...
NR annotation: CAC5377972.1, LRP4 [Mytilus coruscus]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSBQFT00000053963

ATGAAGTTAATAGTGCCGTTTCTACTCTTTTTAAATTATACTCTGGTATCGACTGTAAACCTGCTCTACACAAATGGCCTCAATATTCGATGGCTTAGGACAAACGTGTATGACCACCATCAAAATCAGACCATAATTCAAAATGAAACAATTCTGGTAGACAAACTGGAAAATGCATATGCTGTCGGATTTTTGCATAAGAAACAAATGCTATTTTGGACGGAAGCCCGGGAAGAACACCgtccttcaaaaattacaagGAAGTTTTTGAATGAAGAGAGTAAGTCAGAAGTCATTGTTTCCACTGGGCTGGTCAGACCAGAAGGACTGGCTGTTGACTGGCTCACAGAGAAGATATACTGGACTGActcatataataaatttatcgAAGTGGCAAATATAAATGGGAGTCAACGCCATATCCTCTTCTCAAAGACAAACTTGGATGAACCTATTTGTATTGTTGTAGATCCAATACATGGGTATATGTTCTGGATTGACGGCTTTACTCTTGGGAAACGGATTGTTCGTGCTGGAATGGATGGATCCAATAGAGTAAATGTTATAACTACTAACATCACACAGCCCAATGGCTTAGCTATTGACTATAAAGATTCACGACTTTACTGGTCGGACAGTTATTGGCATTGGATTGCAAGTTCCGATTTCAATGGACAAAGTCGTAAAACAGTTGTTAAAGGATCTTTGCAACATCCCTTTGCAATCACTATTTTTGGTGATCGAATATTCTGGTCAGATTACGATGATAAATCTATCCTTTCCTCTCTCAAGAAAACTGGCAATGAAACATTGGTCGTGAAGAAGAAAGTCGGACGGTTATGGGATCTTAAAGTTTTTGAGCTAAAAAGACAGCGAGAAGaaTCAAAGAATCCCTGTGGTAAACAAAATGGTGGATGTAGTCATCTGTGTTTGCTGGCTCCAAATAATAGCTATTCCTGTGCTTGTCCAACAGGTTTTGCACTGTTATCTGATAATAAAACATGCGTAATTGTATCGACTGTTAACCTGCTCTACACAAATGGCTCCAATATTCGACGGCTTAGGACAAACGTGTATGACCACCATCAAAATCAGACTATAATTCAAAATGAAACAATTCTGGCAGATAAACTGGATAATGCATATGCTGTAGGATTTTTGCATAAGAGACAAATGCTATTTTGGACGGAAGCTCGGGAAGAGCCCCgtccttcaaaaattacaagGAAGTTTTTGAAAGAAGAGAGTAAGTCAGAAGTCATTGTTTCCACTGGGCTGGTCAGACCAGAAGGACTGGCTGTTGACTGGCTCACAGAGAAGATATACTGGACTGACTCATATAATAAATCAATCGAAGTGGCAAATATAGATGGGAGTCAACGCCATATCCTGTTCTCAAAGACAAACTTGGATGAACCTATTTGTATTGTTGTAGATCCAATACATGGGTATATGTTCTGGATTGACGGCTTTACTCTTGGGAAACGGATTGTTCGTGCTGGAATGGATGGATCCAATAGAGTAAATGTTATAACTACTAACATCACACAGCCCAATGGCTTAGCTATTGACTATAAAGATTCACGACTTTACTGGTCGGACAGTTATTGGCATTGGATTGCAAGTTCCGATTTCAATGGACAAAGTCGTAAAACAGTTGTTAAAGGATCTTTGCAACATCCCTTTGCAATCACTATTTTTGGTGATCGAATATTCTGGTCAGATTACGATGATAAATCTATCCTTTCCTCTCTCAAGAAAACTGGCAATGAAACATTGGTTGTGAAGAAGAAAGTCGGACGGTTATGGGATCTTAAAGTTTTTGAGCTAAAAAGACAGCGAGAAGaaTCAAAGAATCCCTGTGGTAAACAAAATGGTAGATGTAGTCATCTGTGTTTGCTGGCCCCAAATAATAGCTATTCCTGTGCTTGTCCAACAGGTTTTGCACTGTTATCTGATAATAAAACATGCGCAATTGATGTGAATGAGTGTGCCACCAACATATGCCATCCCAACGCAAGTTGTAGTAACACGACAGGATCGTTCGTCTGCACGTGTGATACTGGGTTTACCGGCAATGGATTTAACTGTACAGATATAAATGAGTGCACAAGTGACCCGTGCCACCCAAACGCAACCTGTGTAAACTTAATTGGCTCCTACACCTGCATTTGTGACTCAGGATTTGAAGGTGGAGGTTTCACCTGCAAAGATTTAGACGAGTGTTCGAGTGGTCCATGCGACCCCAGTTTAATCTGTAAAAACACACCGGGATCATTCATCTGTACATGTGAATCAGGTTACAGTTATAAAGGTTCAACTTGCTTAGATATAGATGAGTGTCAAAACGTATCATGTCATTCAAACGGGACCTGTAAAAACACTGCTGGATCCTTCTCTTGCTCCTGTAAGTCAGGTTTTGAAGGTGATGGTTTTACTTGTTCCGATGTGAACGAGTGTTCCACCAACATATGCCATTCCAACGCAAGTTGTAGAAACACGATAGGATCGTTCGTCTGTATGTGTGATACTGGTTTTACCGGCAATGGATTTAACTGTACAGAATCGAGCAGACATGATCAAGTAGAAATACCAACAGAATTAATTGTTGCCGTTGGCGTTGGTCTTTTATTGCTGGTCATTATCATTACTTATTTGCTTCGAAAGAAAAGGATTTGTCATAGAAGGAATACGTGTTGTAATCCTCAAGAGCTCGAACCAGCGAACATGAATAGCCCTTACGATGTAAACCTTCGAATCCTATATCCAGAGTATTTCAGCGCTAAAAGCAGCACCTCAGCAGAAGACctattaaaatgggaaattccTCGACAGCGGGTGGATATTCTTGGGGAATCGCTCGGAGGTGGAAATTTTGGTGACGTCAAGGAAGGTATCTACGTTCATCAAATGATAAACTTCGCGGGGGATCGTGAAACTCGTGTAGCAGTGAAGAGCTTAAAAAATAACAATGGCGCAACAGCATCGGAAGAATTGCTAAGAGagcttgaaattttgaagcacgTCAACAGCACAGGCCATCCAAATATCATTGGTTTGGTTGGCGCTTGTACACTGGCAGAGCCTGTTTGGATTTTGCTGGAATACTGTGCCAGGGGAAATCTCAAAGATTTTCTTGTCAACAGCCGATTGGATGAGGGCATACAGCCTGACTACAAAACCATTTCTTCTTTGCTGACCGAAAGAAATTTAATCAAACTTGCTGCAGACATCGCGACTGGCATGGAGTTTTTGTGTGAGCAAAAGGTGAGATAA

Transcript

Protein

Uniprot

Uniprot term	Description
A2ARV4	Low-density lipoprotein receptor-related protein 2 OS=Mus musculus OX=10090 GN=Lrp2 PE=1 SV=1
P98164	Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens OX=9606 GN=LRP2 PE=1 SV=3
C0HL13	Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14670	FXa_inhibition	Coagulation Factor Xa inhibitory site	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF12947	EGF_3	EGF domain	Domain	Interproscan
PF00058	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR009017	Homologous_superfamily	Green fluorescent protein	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050778	Family	Cueball/EGF/LRP/Nidogen	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR024731	Domain	EGF domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46513	VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan