Gene detail

Detailed information of ENSBQFP00000048815.1 in Heliopora coerulea

Genomic Location: :...
NR annotation: XP_019627981.1, PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 homolog isoform X2 [Branchiostoma belcheri]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSBQFT00000055269

ATGGATCAACTACACAACCTTCAAGATTTATTCATCTTTGATGATCCGCTAggtgatcatttccagttatcgtgcaatgttttaaatctgcGAAAACTCGTCCTGTACAACTGCGGATTGACGACCTTTCCTTCGGCCATCACCATGATAAAAGAGCTGGAGGTACTTGGGTtatatttcaatgatttccGGGACCAACAATTTTCACTTCGCGAACTCGTAAAACTTAAGGGACTTATCATTTTCACTTGTAATCTATCCGCTTATCCGGGAGGACTCGAAAATCTCATTGGTTTAGAAGTTTTAAACCTTAAGTTGTATATGGATGAATGTGATCTTCAAGAGCTCCCCCatggactcgaaaattgcgttagtttagaaaaTCTGTGCCTCTCCGACAACAgcaatcttggcaagcagccattttcaattcctgaattgaagaatttgaagaagctgcaTATGGgcaactgtggtcttgaaaagttcccggatggaatcgaaaattgcgttagtttagaagatctgtacCTTACGGACAActacaatcttggcaagcagtcattttcaatttctggactgaaaaatttgaaattgctttACATGGCTGATTGTGATGTTAAAAAGTTCTCGGATGGGCTGAAAAATTGCACTAGCTTAGAAGAAATGAGCCTTTCCTGCAACAAAAACGTCGGCAAGCATCTTTTTTCAATTACTGAACTGAAAAACTTGACGTTTCTGGATATGAGGCAGTGTGGTCTTGAACAATTCCTTGCTGGACTCGAATATTGCGTAAGTTTAAAAACTCTGTACCTTTCCTTCAAcgacgaccttggcaagcagccattttcatttacaaaattgaagaatttggaGGACCTgtatatgagtaactgtggtcttgaaaagttcccagaTGAActcgaaaattgcgttagtttagaagttctagacCTTTCCTCCAACAGCAAACTTGGAAAgaagccattttcaattcgtaagctaaagaatttgaagaagctagatatgagtaactgtgatgttgaaaagttcccggatggactggaaaattgcattagtttagaagatctcgactTTTCCTCCAAcggcaaccttggcaagcagccatttgcaattcctggactgaagaatttgaagaaactagATATGAGAAATTGTGGTCTCGAAACGTTTCCGGATGTACTTGATATtagcgttagtttagaagttctaCTAAAGAATTTAAAGGGGCTAGATATGAGGAACTGTGGTCTTGCAAAGTTCCCGGATGAACTCGAAAATTGtattagtttagaagttctagacctttcctccaacggcaaacttggcaagcagccattttcaattcgtaagctaaagaatttaaagaagCTAGATATgggtaactgtggtcttgaaaagttcccggatggactcgaaaattgcgttagtttagaagttctaggcCTTTCCTCCAACGAAAATCTTGGTAAGCAGCAATTTTCAATACCTCAGCTAAAGGATTTGAAGAAGCTAGATATGAGGTACTGTAGTCTTGAAAAGTTTccggatggactcgaaaattgcgttagtttagaagttctaaaCCTTTTATCCAACAAtgttggcaagcagccattttcaatacctcagCTAAAGAATTTAAAGGGGCTAGATATGAAGAACTGTAGTCTTGTAAATTGCGTTAGTTTGGAAGTTCTAGATCTTTCCTGGAACGGCAAACTTgccaagcagccattttcagtACGTCAGCTAAAGAATTTAAAGGGGCTAGATATGAAGTattgtggtcttgaaaagttccaggatggactggaaaattgcattagtttagaagatctcgacctttcctccaacggcaattttggcaagcagccattttcaattcgtaagctaaagaatttgaagaagctagatatgagtaaatgtggtcttgaaaagttcccggatggacttgAAAATAACATTAGTTTGGAACATGTAGATCTTTCCATTAATAACCTAGCTGACAAAGAATTTTCAATCCCCAGCTCATCGCCACTGAAAACACTTAAGTTAGGATATTGTAAAGTCGACCATATACCAAATGCTGTATTCAACCTTCCCAATCTCGCCCAGCTAGATATGCGTtcaaacaaactgaaagaaTTGCCTGCACGTTTTACTACGTTAATAGATAAGAATGTAAAATTTGACCTTGAAAATAATGCACTAGGTAAGCCGCCACAAGTTATCTGCAGCAGACCTAACGCGATTTTGCAATATTTCAATGACCTTGCCAAATTCAGAACAGTTCACTCCAAACGACTTAAagtgcaggtgattggaaattctggcGCTGGGAAAACGAGTCTGATTAACGGTTTAttgatgggacagtcaaagttgacaGAACCAGAGGAGAGAACTGAGGGTGTTGAGATCAGACAGTGGATTCCAGGTCCTGCGATtgaagatcttgaactagaatTCTGGGATTTCGGCGGTCAGATGGAGTACCAAAGTGTTAGCCATTACTTCATCGAACAgcattccttgtttcttttagTTGTGGATTTGTCATCATATAGAAGGACTGGTAAATCGTATCATAAAAATGCTGGCAAATGGATTGATGAGTTAAAGAACATTGTACTTCGACCAGTCATAGTGTTAGCTGCTACAAAATCTGATCTAGTTGAAAAGAGCATTGTAAAAGGTAGATGTGGGCATTTGTTGGAAAAAATTATCAAACAAGAGACGGCTGATATAGCGGCAATAAAAGGGATAAAGAGCAGATTGATAAAACCAATGATTACAAGAGCAATCGAATTGAAAAGCTTGAGTCATCGGTAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00560	LRR_1	Leucine Rich Repeat	Repeat	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050216	Family	Leucine-rich repeat domain-containing protein	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48051	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan