Gene detail

Detailed information of ENSCIQP00000000899.1 in Millepora alcicornis

Genomic Location: :...
NR annotation: XP_047126289.1, RNA-binding protein 26 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSCIQT00000001097

CCGCCGGTGTTACCCGGCCAGTACATGCCAGATATACTGCAGCAGACACACTACCTGCCCATGAGCATGGCTAGCCAGCAGTACCATCAGCAAGTGCAATTACAACAACAAACTTACCTCAACAGcttgcagcagcagcagcaactcCCAGAACAACAACAGCAAAGTGTTGTTCAAGTCCCAACACAGTTACCGTTCAGAAAGAATGTCCTGGAAATTCGAAAAATTCCAGCACATTTTAATACTATTGCCAAGCTGAGTgagcatttccaaaaatttgGGACCATTACGAAAATTCAAACACCCCTGGAAAATGACGCCCAGGGTGCACTCATCGAGTTCTCCAGTGCAGCAGAAGCAAATAAAGCGTACAGCTCACCAGAACCAATCTTTAGCAACcggtttatcaaagttttctggtatAACCCGAATCGGAATCAGAACAACGGCTCGGTAATCTTGATGAGTGGAGCCAAAGGTAAGCTGAGTGCTACCCAGAAAGATTCCTCATCGGTGGAAGTGAAACCGAAGAAAGTGGCGAACGCTGAGGAGCTAAAGTATGTCAACCCAAACGCCGATACGGTGCAGGGCAAGCTCGAGAAGAAGAAGgaaattgaaaaattaaaagcggaGTTagcgaaaaagaaacaaacaagttACGATGAACTgattaaaaagcaaaagGGAATTCTCAGTAAATTAGAAGACAAAGATCTGAGCAAAGAAGAAAAGCAAAGGCTGTTAAAGGCTTTCAAAGCATGCGACGTGGCtgttcaaaaattaaagaaggaGATTATGGAGGACACGTTGAAAGCCAAGAGCAAAAACAGCCCCATGAAATCATTCAGAGATCCGAAGAAGGAAATCCTTGATCGTGAGATGGACATTTTCCACGGCAATCTACAGGGAGAGGAATTGGCGGAAGCAAGGAAGTCATTGGAGGAACTCAAACGAGAGATGTACACTCCAAGAGGAAGAGGGTACCGCGGTCGCGGACGTGGCAGAGCTTCTTGGTACCGGGGCCGAAGTCGTGGCAGAGGTAGAGGTGGCTATACAAGTGGCACCACAGTTGACAACAGGCCAAAGCAAATCTTGGTATCTGGGTATGAACCCAGTGAGAAAGACACCATCGTCTCCCATTTCACGGCATTTGGTCAACTGGATCGCATTGAAGAAACAGCAGTCGATAAAATGGTGCTGACATTTCCTTCACGAAAAGCAGCGGAAATAGCTGCCATACAAGGTGCTGAGTTTAATGGAAAAACGTTGGTGCTAGCGTGGTTCACAGGTCACCTCAAGTCGTCTCTGGGCAGCGACGGGCCACAAATACAACGTAGAGTGACACGATCCTTGAGTCAAAGTTTAATGGAGAAGGACCTGGATGATGAATTGCTGGAGTTGGACAAGGAGGAGGAGGAAATGTTACTGGCCGGCGTCGATGATGACGACGACGATGACGAGAATTCGTCAGAAACAAACGAACGTTCTTGGAGGCGATAAATCTGAAAGTCGTTTAGACGATAATTAATTCGTGCTCTATATAGTTTAATTGACGACGTTGTGTTTGCTTCAGTTGGTAGCAACGATACAGCGTGATGAAGTTATTGTTTGAACTTAACAACAAGGTCTTAGGTTCAATGTATTGAACTTAGATATTTAATAaagattgttttcaattttattaactAGTTCCGTATTTACAatttagttattttgaaatttttgagatgttttctaaattttggaaGATATGCGATAAAGTCGCGAATTTTGAAAATTcgatatattttttgtagaatgTAGAGCATCACTGGGATGATGCGACGGATATACGTATTTTGATCATGAGTAATTTTGGGGAAAAGATGTTTAACTTCAACTTGCTCAGCAATCTGCTGGAAGACCGTACGGAAGCGAACCGGAAaagataaatttagttttatttgagaATTATATCCGCCTCCATGGAAAATTTGTAATTAACTTACTTTAGAggtttctgcaattctttttgatTATAGAAGCTCGTTCTTTTTGATTATGGGAAGTAAGCGTGTGATACTCCAGGAAACGAATTGGAATACTGAGAAGTGTGTTGTTTCACAATTGTAAAACTCGTTCCCATATCCCTATaactttgttttaacatttgacaATGCGTTAGCATTAATATCGATAGCAGATACTGCGCTGAATGAGATGAGTTTGTTTTTGCACACTAATTTGAAATAAGCCCTGAAGTCATCTGAAATGACAGATATAGCAATGTGAACGATGAGATTAGTGAGTAGTGATTTTCCTTACAAATATGCCAAATgaccaaaaaattttgttggcCTTTTTTATGAAGAAAGGGAGGAATGGGAGCGAGTCGTTAATATAGAAACTTGTA

Protein

Uniprot

Uniprot term	Description
Q9USP9	Uncharacterized RNA-binding protein C902.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC902.04 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14605	Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR045137	Family	RNA-binding protein 26/27	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14398	RNA RECOGNITION RRM/RNP DOMAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan