Detailed information of ENSCIQP00000001562.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_020606211.1, activator of basal transcription 1-like isoform X2 [Orbicella faveolata]
Species abbreviation MALCI · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4KLM5Activator of basal transcription 1 OS=Rattus norvegicus OX=10116 GN=Abt1 PE=1 SV=1
Q9QYL7Activator of basal transcription 1 OS=Mus musculus OX=10090 GN=Abt1 PE=2 SV=1
Q9ULW3Activator of basal transcription 1 OS=Homo sapiens OX=9606 GN=ABT1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006050 (this species only)

 Pfam domain
No Pfam domain signature was detected for ENSCIQP00000001562.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR034353
all species →		DomainABT1/ESF2, RNA recognition motifInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR039119
all species →		FamilyABT1/Esf2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12311
all species →		ACTIVATOR OF BASAL TRANSCRIPTION 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000447
all species →		Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000472
all species →		Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480
all species →		Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0034462
all species →		Biological Processsmall-subunit processome assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSCIQP00000001562.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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