Gene detail

Detailed information of ENSCIQP00000001686.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_002160543.2, single-stranded DNA-binding protein, mitochondrial [Hydra vulgaris]
Species Millepora alcicornis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P09381	Single-stranded DNA-binding protein 1-B, mitochondrial OS=Xenopus laevis OX=8355 GN=ssbp1-b PE=1 SV=4
Q32PB0	Single-stranded DNA-binding protein, mitochondrial OS=Bos taurus OX=9913 GN=SSBP1 PE=2 SV=1
P09380	Single-stranded DNA-binding protein 1-A, mitochondrial OS=Xenopus laevis OX=8355 GN=ssbp1-a PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007472 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00436 all species →	SSB	Single-strand binding protein family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR000424 all species →	Family	Primosome PriB/single-strand DNA-binding	Interproscan
IPR011344 all species →	Family	Single-stranded DNA-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10302 all species →	SINGLE-STRANDED DNA-BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0006264 all species →	Biological Process	mitochondrial DNA replication	Interproscan
GO:0009295 all species →	Cellular Component	nucleoid	Interproscan
GO:0042645 all species →	Cellular Component	mitochondrial nucleoid	Interproscan
GO:0051096 all species →	Biological Process	positive regulation of helicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03111	ssb; single-strand DNA-binding protein	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.