Gene detail

Detailed information of ENSCIQP00000001742.1 in Millepora alcicornis

Genomic Location: :...
NR annotation: CAI5830901.1, unnamed protein product [Callosobruchus analis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSCIQT00000002076

AACTTTCTACAAATTTCTTAAACTACTACGCCGTCTTAAATAGTTCCgcgaaaaattttggaaaaccgAACTCACTGGATTATGATGTCATTGAGGAAACAGTTTATTGGGCGGATGAAAAAAATGGAACTCTGAAGAGAGCACGATTTGGCGCGACAGCAATTCATGTACTCGCAAGGAATGTGAGACCTGTCACTGTAAAAGTTGATTGGATTGGACGCAAATTGTACTGGttagaaaaagGGAGTATCAGCGTATCAGACCTTGATGGAACTAATTCAAAGATTATACTTAATATCATGGAGGGTGAGGTGTTACAGGGATTGGCTGTCGATCCTGAGAAAGGtcaTATGTACTGGTCAGATATTGGCGATAAACCTAAAGTAGTGCAAGCGTCGCTGGACGGTACTAATTGTGTAACAATGTTCAGCTCGTCGGAAATAAAGATGGCGACATTTCTCACAATAGATCGTCGCTCACAGCGACTCTATTGGTTCGATTATGGTAGAGATCATATTGCTTCGAGTAATCTAAATCGCAGTGATGTCAGAGTAGCCGTAAATGTCAGTCGTTACAACTGTTCACTTTTTGGGCTAACTGTTTTCGAGGATTATGTATATTGGTCATGTCaccatcaaaacaaaataaataaagcaagcAAGTTCACTGGGAAAATAATTGGGCATTTTGAAGAAAGTATCACTGGTCTTCCACTCGATGTTGCAGTTTATCATCCCTTAATGCAAAAAGAAGTGTATCATCCATGTCAGAAGTCGAATGGTGGCTGTTCTCATCTATGCTTTATTGCCAGTAGTCATAGTGGTCAGGTGCACATGTGTGACTGCCCAGATCATATGGAGTTATATTCAGACAATAAGACATGTATacctaaaaatattccaaaagttaaCTGCAATAGTGGATTTGTTTGTAAAGTTACAAACAGTTGTATCTCTCAAGAGCATGTATGTGATGGAATCAAAAATTGCATATTTAATGACGATGAGCAGAATTGTGTTTCTAAATCGAGCAAGGCGATGGAGAAGTCGAAATCAACACTTTATATTCCAATTGTTATATGCATATGTGTTCTTTTGGTAATCTTAGTGGGAACCGTGTTAGTCTGCAGACATTATCGTAAGAGACGAGATCATCTAGTGGAAATGAGCATGGTGTTCCAGAAAGATACCGAAATCATCATGGACAAGGACGATTTAGGTAAAGATTATGAACAGAAATATATACCAaatgatgctttaccaaattgtaaaagaaatttaaCTAAGAAAAACTTCGATGAGTTGAGAGTTCCGCTTCATCCAAATATGGACACTGAGTGTATGGTAGATGAAGAAAATAGTCTCATTGGAGATGCATCCTTTAGTGATACTATTCCAATCATAACGTGATACTTCCGTGTCGTCACGTGACTTTCATGTGCACTGCAACCAACTGAACGGTCAAAAAACGACGCAACATTGGTCACCTCGAACAGAAGTTTAGAAAAGTGTGGAACGAAGGAAAATGGCGGGTCCGTTAGATTTACCAAAAAACCTCAGGAAAGAAACCTCAAACAtttcagtgacgtatccagagttttttgggcAGACCCGTACATACCTCAAACCTTTGAAGGCACCACCATAGTTGGCGTCGAGCgggtacattttcaaaatctgtgcctctaaatgctctaaaaatgcactccctggccCTGTCTGGTCCTagatttctttaaacattttccaaattacttaagtttacattatgaaGCACTTTTCttcgtggatgatttttaaagaattcataaTTCATATATTATAAACTTGTGAGAGCTGCGAAGCGATCTGAGAGGACGTTATGCCGCAAGTAGCacagaaggaatcacacgaaGTAGTATAAACCATTTACGTCATTTAATGACTTGGAGCGGTTCGTCAACAAATCACGGAGAAAAAGCGATTTTTATGATCACGTATTTTTTGATTACgtatttaaataaatgaaacactTTGACAATTTCTTCTTTCGCTTCGACGTCTTtatgtctcattgtttttctcttctgtcagcattttttttgttgaaatacaactgaaaaaacaaaacttgaaaagtgttgtgcccaaaccggtataccggtctCCCAAACGACCTGGATACGTCCCTGCATGTTGACCGATTGGTCGTGGAGCATACAATGCTTGATTCTTTTATTGCTGTTTTCCTGTTGATGGAATGGACTACTATTTACTGACGACGACAAATCTGgaagaaattatgaaactttGCTAGGACTTACCTATATAGTATCTGGTTGAAAAATATAACTAAACCCAAACTTGACGCTTCCAGGGGGTCCGGTAGGGCACATTTAAAAAAGGGGGGGTGGGgagtaaatcatgaaa

Protein

Uniprot

Uniprot term	Description
O75581	Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens OX=9606 GN=LRP6 PE=1 SV=2
O88572	Low-density lipoprotein receptor-related protein 6 OS=Mus musculus OX=10090 GN=Lrp6 PE=1 SV=1
Q99087	Low-density lipoprotein receptor 1 OS=Xenopus laevis OX=8355 GN=ldlr-a PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR050778	Family	Cueball/EGF/LRP/Nidogen	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46513	VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0017147	Molecular Function	Wnt-protein binding	Interproscan
GO:0042813	Molecular Function	Wnt receptor activity	Interproscan
GO:0060070	Biological Process	canonical Wnt signaling pathway	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan