Gene detail

Detailed information of ENSCIQP00000003030.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_012554758.2, TBC1 domain family member 1 [Hydra vulgaris]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

Transcript

ENSCIQT00000003589

GTCttagaataattttaatgaaatcatcAACTGATAAAATTCATAAGAAGTATTATCGCTGGGAATTTTACTTGATACTTGGAGATTTATCTATTAGTTATGGTCATATTGACTAAAAAACAATTCAACGTAATGATTGAGAGAAAGAAATCCATATTTCATCGCTTGTTAGTTCGAAATAATTTACATGGAAAATCGACACAGACCAGGGTTATTAAACAGTTTGTTCGAGTTACCCTTAGTGGAGTGGAAGGTGATGATATACAGAAAAAAGTAGACCCAGGAAGGAGAGCTAGAGAACGATGGAGAAATGCCATAATGAGCCAAATTGTTCTCATCcgaatggaaaaagaaaacaaaaaattagcagCTAAGATATCAGCTACAGAAACAAGAAGGCAGAAACTTTCTTATGAAGAATTGGGAAGCTACACTGCAGAAGCAGCACATCTTTGGGAcgagatattgaaaaatacaaacgAGCGAATAGATAGTCATCTTCTTCGAGAAGCAATACGTGGAGGCGTTCCCAAGGCAAGGCGAGGCGAAATATGGCAACTATTAATGAAACAGAGCAGTTTACGAAACCCAGTTCAGACCAATTCATTTAACTGGAAAGACAAGCCTTATAAATCTTTAGTACGACAGAATACACAACATCAACATGCTATTTTAATCGACCTAGgTCGAACGTTTCCTACACATGCCCATTTCATCCCACGTCTGGGTTCAGGACAGATTGCTTTgtataacattttaaaatcatattCTCTACTGGACCCGGAAGTTGGATATTGTCAGGGATTGAGTTTTGTGGCTGGTCTTCTGTTAATGCATATGTCAGAGGAAGACACGTTTAAATCTCTATGTTACATGATGTTTGATTTAAACATACGAATTCAGTACAAGCCAGATATGAATGCAGTACAgCAACAGATGTATCAGCTATCTCGTTTACTACACGATTATCATCCTGCGTTATATGAACATTTCAATAAACATGACGTGACGCCAACTTTGTACGCCGCCCCCTGGTTTTTAACATTATATGCATCTCAGTACCCAGTCGGGTTTGTTGCAAGAGTAATGGATCTAGTATTCCTAGAGGGCTTAGAGATAATATTTAAGATTGCTTTGACCCTAATTGGAAAACATATCGATGAAATTTTACAATGTGATAGTTTTGAGAATATTGTAGATTATATGAAACTATCATTACCAGAAAAAGTTGCAAATGAAACAGACGAAATATGTATTACAGCACTTGATATGGATatcaaacaaaaactgaatttgtACGAAGCAGAATACCAGCTGCTGAACGAGGAAATGATTGATATTCGTcagaataaagaaaagtatgaaaaacaagaacttaaacaaaaagCCCTCGAAGAAGAGGTTATTCAACTTAAAAGTGACTTGAGTTCAGCTACTAATACAATTGCTTTATTAAAACAAGAACTGGAAttagcaaatcaagaaaaattgacCTATCAGAATCAAATTCGTGCTCTTTGTAGTGAAAAAGAATCGATTCGTTCAAATAAACATTTAGTCGATGGTTGTGAGGGTACTCAAACATCAGATAACATTAGTAGACCAGACTGCATAGTAATGTCTAGTCGGAAAATGAAAGTCGTGACTTCAATTGATTCCAGTGGAATTGGTAGTGATCTCAGTCTAGATTCTGTCACAAGTCCTACAGATAAAACTGACATTAGATTACCAGACACACATTCATTAAACTCAAGTTCAAGTACAGATAGCAGTGAAATCTTAATAacgaaaaatgaaaagatataattaaatattatttttacggCAGTATTTTTTCTTGTGCTGCTAAGGATAGCTATTATGAAGTGTTCTTGAAAGTGAATTACCTAGAATTTTGGAACAGTTCcaggaaattttcttttttgacgcTCATTTTCGAGGAAAAACTACTTTAGAAAAGGTTactttattaactctttcatgacggag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86TI0	TBC1 domain family member 1 OS=Homo sapiens OX=9606 GN=TBC1D1 PE=1 SV=2
Q8BYJ6	TBC1 domain family member 4 OS=Mus musculus OX=10090 GN=Tbc1d4 PE=1 SV=2
Q60949	TBC1 domain family member 1 OS=Mus musculus OX=10090 GN=Tbc1d1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003545 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00566 all species →	RabGAP-TBC	Rab-GTPase-TBC domain	Family	Interproscan
PF11830 all species →	DUF3350	Domain of unknown function (DUF3350)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000195 all species →	Domain	Rab-GAP-TBC domain	Interproscan
IPR050302 all species →	Family	Rab GTPase-activating TBC domain-containing protein	Interproscan
IPR035969 all species →	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan
IPR021785 all species →	Domain	Domain of unknown function DUF3350	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47219 all species →	RAB GTPASE-ACTIVATING PROTEIN 1-LIKE	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSCIQP00000003030.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000003030.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.