Gene detail

Detailed information of ENSCIQP00000003682.1 in Millepora alcicornis

Genomic Location: :...
NR annotation: XP_047137153.1, uncharacterized protein LOC100210754 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSCIQT00000004279

atgaaaatattaatcttCTTAGAAACGATCGCTCTTTTACGAATCAGTTGCAATGAAGAAACAGTCAGTGATTTCTTCAAAGAACCTGATGAAGTATGTTTTGATAAAGAGGACTGCCAGCAAAAAACTTTTCCTCAAGGACATCTACGAAAGCTAGGTGAACATACAGGAACTATTACGGATGAAATATTAACGCTGGATTATATGATCAGTGGGaaagacttttatgaaaaatttgcaagaaaaagaaaacctgttcatttcaaaaatgtaacttatgattgGGTAGcaacaaaatattggaaaaatgagagttatttattacagaattatgctgatatattttttgatgttgaattAGGAAAAATATATACTAAACATTTACATCCGCGTAAAACGATGACGTTTAAAGAGTTTTTACGTACTTATAAAAACACATCAATGTATTTAGATTCACCATTCCCTCAATCAGAAATGATGAACGATTTGCAGTTGCCATTAATGATGCAGTGTGAGTGGTTACACAAAGCTGTAGCAAGCTcccatttcttattttcaaatggGAACACAAGTTCTGTATTACATCATGATGGCTATGAAAACTTTTTAGCATTGTTTTCTGGACGTAAAGTTGTTTATGCAATGGAACCAAAATATATTAAGGAATTATATATGGATGAAGTTGAAGATTTCCCAGGGTTGTCACCAATAAATCCAGAAGCTGTGGATTTGGTAAAATATCGCAAATTTGTAAATGTTCCTGTACACAAGGTATTcATAGAATTAAAGGCTGGAGACATACTGTACATCCCACTTGGTTGGCACCATCAGGTGAGATCCTATGACTCACCAAATATTGCTGTGTCAATGTGGTTCCACTTGATTGACTATGAAGGAGAGgACGAATATTCTTTTCGTGATGCAGTGATGCAGGAAGAGTATTTTGATCGTCAAGTGAATAAACTTCCCGAAACGATCGAATGCCGCTATCAAAATGTTCCTATGAAATTATTGTCTGAATTGAAGAGTATGAGAGATATTCAAGTTGCCAATAATACCAAAGAACCCATAGGTAACGAAAAGGTGGTTCAATTAAAGTTGTGGCGTCATATTTTAGTCTTTGTGTTGAATATtacaaatgttaatatttttaggcttatacttcattatatttattatgaGTTTCATATAGTGAAAGAGCAAGAGATGCCACAGAAAGTGGAAAACGATACATTGGTAAACAGTACTGTCATATACCAGAAGGTAGACCTCGATGATGGGACGCTGTTCATTGGGTCCGATGACACATGGATATATGCTGTTAGCCTGAGCACGGGGAAGGTCATGTGGAAAACACAAACTCGAGAAGATACGGGTTCTACATGTGCATTCAGTAACGATGAGCGTTACCTATATTGTGGAGCAGATGATGGCCACCTTCGCTCCATGCTGGTTGAAACTGGTCAAGTAGTTTGGGCATACAAAGTTGGCAAGCCAATAATATCGTCAACAAAAGTAGACAcgaaaaataatctttattttggTAGTACAGAtggctttttttatgttttaaacccAGATGGAACTTTAAAgtggaagaaaaatttaaaatatatgatgTGGAGTACGCCAGTTTTATTGGAAGACGAAAATATGATCTATATTGCAACTCAAAACGACAGACGATCAAATATGTTTGCGCTTAATATGAAAACAGGAAGGATCGCTTGGAAGTATAATTTAATTGGTGGTATGACTTCGACCCCAAGaataaatcaaataacaaattctATTTATGTTTGTACGCATTATGGGGATAtatattcatttgatttaataaatggTTCTGCAGATTTGATTTCACATTTGAGTAATAAACGTGACGGTTTCCAGGCATCGCCAGCGGTTGATGAAATCAATATGATGATGTATATAATAAGTAATCAAGGTGTAATTGTAGCAGtagacataaaaaagaaaaaaattgtttgggaGATGCAAACTTCGTCGGGTAAGTTCTGTTCCAGTCCGTTGCTTGGTCCGGGAAATATGCTTTACGTAGGTGCAAGTAATGGGACCTTGTATGCGATCAATATTGAGAATGGACCTAATGTCATTTGGAAAATCGATATTGGTACCGCCATCTTTTTTAGTTCTCCAAAATTGGATGTAAATAGAAATTTGTATATTGGCACAGTTGATGGCGATATAGTTGCTATAGAAACTGAAACAGGTCTTGTGAGATGGAAAGTCGAGACTGAAGGACCAGTTCCAGGGACTCCATTAATcacaaataaatatcaatatatctATAATTTGCATCATAAAGAAATGGgtgattaa

Transcript

ENSCIQT00000004279

Protein

Uniprot

Gene family

Uniprot term	Description
F4K2M8	Lysine-specific demethylase JMJ31 OS=Arabidopsis thaliana OX=3702 GN=JMJ31 PE=2 SV=1
Q54FG7	JmjC domain-containing protein F OS=Dictyostelium discoideum OX=44689 GN=jcdF PE=4 SV=1
E1C7T6	tRNA wybutosine-synthesizing protein 5 OS=Gallus gallus OX=9031 GN=TYW5 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13360	PQQ_2	PQQ-like domain	Repeat	Interproscan
PF01011	PQQ	PQQ enzyme repeat	Repeat	Interproscan
PF13621	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002372	Repeat	Pyrrolo-quinoline quinone repeat	Interproscan
IPR003347	Domain	JmjC domain	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR018391	Repeat	Pyrrolo-quinoline quinone beta-propeller repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR041667	Domain	Cupin-like domain 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12461	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016706	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan