Genomic Location: not available for this species
NR annotation: XP_047137813.1, putative autophagy-related protein 11 isoform X1 [Hydra vulgaris]
Species abbreviation MALCI · all data for this species · gene families
| CDS |
| ENSCIQT00000006197 |
| Transcript |
| ENSCIQT00000006197 |
| Protein |
| ENSCIQP00000005330.1 |
| UniProt accession | Description |
|---|---|
| P97868 | E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus OX=10090 GN=Rbbp6 PE=1 SV=5 |
| Q7Z6E9 | E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens OX=9606 GN=RBBP6 PE=1 SV=1 |
| F4JP52 | E3 ubiquitin ligase PARAQUAT TOLERANCE 3 OS=Arabidopsis thaliana OX=3702 GN=PQT3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003950 (this species only) |
| Ubiquitin family | ULD|UFD|DWNN · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 activity RING|U-box · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13696 all species → | zf-CCHC_2 | Zinc knuckle | Domain | Interproscan |
| PF08783 all species → | DWNN | DWNN domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014891 all species → | Domain | DWNN domain | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR036875 all species → | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR025829 all species → | Domain | Zinc knuckle CX2CX3GHX4C | Interproscan |
| IPR001878 all species → | Domain | Zinc finger, CCHC-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15439 all species → | RETINOBLASTOMA-BINDING PROTEIN 6 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006511 all species → | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0016567 all species → | Biological Process | protein ubiquitination | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
ENSCIQP00000005330.1.
