Gene detail

Detailed information of ENSCIQP00000006389.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_047128873.1, uncharacterized protein LOC105846434 isoform X2 [Hydra vulgaris]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

ENSCIQT00000007543

ATGATATCTCCAATATTGCTCCTTTTAGGCATAGTCAAAATGAACTGCTACAATTGCGGCAAAGAACTTGCTGATgacagtcaaatatttttttacgtgaAAGGCCAGAAGGAAGTATACCTAGCAATCAAGCCggaattaaaaacgttttttgaggaaaagaaaacaataattagaTCAAGTACGTCAGAGAAGAAACCTCGTATCGAGTGTAGGGAATGTAACTCTGCTGTTGGACGAATTTTGCCATTTGGCCCAAGGAACTGGGAATTAACATCATTTACATGTCGAAAAGTAAAGATCAGGAACATGTCATACTTTGGGAAGGTTTGGTATAATATATGGAATATGTTACCCATAGAAACCCGTGACACCgggaatttttttaaagataataatcaaATTCAAAAGCAGGAGAGAAATAGcagtagaaaaaaagttttcatcgacCCAGTAAATTTTCCTTCCGtcgaaatgaaaaaagaattcgaATGGTTCACAATATTAAAGACTAATAAGGCTCCCCGTGAGTATCAGATTGAAGCATTCGTAGAAGGACTGCAGAGAAACATTGTTATTGTGTTAAATACGGGAGCTGGGAAAACATTAATTGCATCAATGATACTGGCCAAGATGTGTGAATTGAACTCAGGCCGTATGGGATTGATGATCGTAGATCGAGTGCCTTTAGCCTTTCAACAGCAACGTGCGATTGCAGTTGATACATATTTGAGGGTGGTTTCTCTCTGCGGGGAAAACATGACAGAAAACGTCGTGAGTcaaataaatcatgactattatGATATTTTAATTGCCACTGCTGGTGCTTTTTACGAGATGTTAGAGAAAGAATATGTTGACTCCTCGTTGTTTTGCTGTGTCATTTTCGATGAATGTCATCATTTGACAGGGAAGCATCGTTACGTTGATGTCATGAAAAAGTTCACTTCTCAGAAAGTGTCGCATCAGCCAAGAATTATTGGCTTAACTGCATCACCATTTTCAGCAGATACCATAATGGAAGgcgaaataaaattaaagaagttcCTTACAAATTTTCCCGATGCAAAGGTATATGCTCCATTGTCAGAAGAGAGTAACCAGAAAATGCTGAATGAGCTTATATCATTATCAAGAGACCAGGAGCGCTTCACTGATGTAGCAGTTGATAGAATAAATGGACATCTATTCGAAATTGCTAGAGTACGCACTGCTCAACGCTTTGTACTAAAACGGAATTTAAGTAACATTAATCAAATTATTGGAGAATTACGGTCACTGCAGATATGTTATCCACAAAAGCAAAagctgaaaaatattcaaaatgccTTGTTATTAATGGAAGCATTGgaatattcaatttattttggaGTGCCTAGTTCGCGTAACTTTCTTAAAGATGGAGGaggttttgagaaaatttgtGACGAGTTTCACCATGTAGCAGAAGTCTCTGAGCGGTTACAGGTTTTATACTCATATCTTAAGAAAGCAACAAATGATTCGAAAATTCTTGTATTTGTTAATAAACGAAGTATAGCGAGATTTTTAACAAGATGGATACAAACAGAATTCCCAGATTTAGATGCTCAAATGGTCGTTGGTCATGGGGGTTTTGATGGTATGACGTGGGAAGGTCAGTATCAGCAATATGAACGTATCCAAAACTTTGCTAAAGGGGATTCTCGATTGATAGTCACCACCTCAGTACTTGAAGAAGGGATTGATATTGCCCGGTGTGACTTAGTGATCGCGTTCATGGGGTCACGAtccttaataaaatttattcaaatgcGTGGTCGCGCACGGAAGCCGGAAGTCCAAATGTTCGTTGCTTATATTACATCCAACACCCATTTTGAGTCCCCTTTGGCGCTTTATAGGGAATTTGCAAACTATTTTGATTATTACATCACTATTTCTGAAACTGTTCACCAGATATGGTCGGATATTGAAGTAAgagattttgaagatttaactAAAGCCCAgcgagttttttgtaaaaaactttctgTCGGTTATTTTCAGAATCGTTCCTCAGTGGTACTaggaaaagtatttgaaagagaGAGTACAGTTGTTTTCAACTCTCACAAATCGATTACCATAGAATTATTTGTAGATGATGCAGTTGTTGACAAAGTCGAAATTAAGTTTCCAGCAATATCTAAATTTAGTTTCCTGTCTGTAAACAAAGATGATACTGTACTGTACGTTAATTTGACCCAAGTACCGTTATTTTCAATA

Transcript

ENSCIQT00000007543

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q09884	Protein Dicer OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dcr1 PE=1 SV=1
Q2VF19	Dicer-like protein 1 OS=Cryphonectria parasitica OX=5116 GN=DCL-1 PE=3 SV=1
Q5N870	Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3A PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000941 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF04851 all species →	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR006935 all species →	Domain	Helicase/UvrB, N-terminal	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR051363 all species →	Family	RIG-I-like Receptor (RLR) Helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14074 all species →	HELICASE WITH DEATH DOMAIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000006389.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.