Gene detail

Detailed information of ENSCIQP00000007384.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_002169066.2, E3 ubiquitin-protein ligase CHIP [Hydra vulgaris]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9WUD1	E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1
A6HD62	E3 ubiquitin-protein ligase CHIP OS=Rattus norvegicus OX=10116 GN=Stub1 PE=1 SV=1
Q9UNE7	E3 ubiquitin-protein ligase CHIP OS=Homo sapiens OX=9606 GN=STUB1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005562 (this species only)
Ubiquitin family	E3\|E3 activity RING\|U-box · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18391 all species →	CHIP_TPR_N	CHIP N-terminal tetratricopeptide repeat domain	Repeat	Interproscan
PF12895 all species →	ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	Repeat	Interproscan
PF04564 all species →	U-box	U-box domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003613 all species →	Domain	U-box domain	Interproscan
IPR041312 all species →	Domain	CHIP, N-terminal tetratricopeptide repeat domain	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR045202 all species →	Domain	CHIP , U-box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46803 all species →	E3 UBIQUITIN-PROTEIN LIGASE CHIP	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006515 all species →	Biological Process	protein quality control for misfolded or incompletely synthesized proteins	Interproscan
GO:0030018 all species →	Cellular Component	Z disc	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0045862 all species →	Biological Process	positive regulation of proteolysis	Interproscan
GO:0051087 all species →	Molecular Function	protein-folding chaperone binding	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0071218 all species →	Biological Process	cellular response to misfolded protein	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09561	STUB1, CHIP; STIP1 homology and U-box containing protein 1	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.