Gene detail

Detailed information of ENSCIQP00000010270.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_047128105.1, protein RRP5 homolog [Hydra vulgaris]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NS46	Protein RRP5 homolog OS=Mus musculus OX=10090 GN=Pdcd11 PE=1 SV=2
Q14690	Protein RRP5 homolog OS=Homo sapiens OX=9606 GN=PDCD11 PE=1 SV=3
A7MB10	Protein RRP5 homolog OS=Bos taurus OX=9913 GN=PDCD11 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003198 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05843 all species →	Suf	Suppressor of forked protein (Suf)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008847 all species →	Domain	Suppressor of forked	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR003107 all species →	Repeat	HAT (Half-A-TPR) repeat	Interproscan
IPR045209 all species →	Family	rRNA biogenesis protein Rrp5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23270 all species →	PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000010270.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.