Detailed information of ENSCIQP00000011563.1 in Millepora alcicornis

Genomic Location: chr2:182807333...182864239
NR annotation: XP_047124558.1, pre-mRNA-splicing factor PRP46 isoform X3 [Hydra vulgaris]
Species Millepora alcicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q922V4Pleiotropic regulator 1 OS=Mus musculus OX=10090 GN=Plrg1 PE=1 SV=1
Q2KID6Pleiotropic regulator 1 OS=Bos taurus OX=9913 GN=PLRG1 PE=2 SV=1
Q9WUC8Pleiotropic regulator 1 OS=Rattus norvegicus OX=10116 GN=Plrg1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012330 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045241
all species →		FamilyWD repeat Prp46/PLRG1-likeInterproscan
IPR020472
all species →		RepeatG-protein beta WD-40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19923
all species →		WD40 REPEAT PROTEINPRL1/PRL2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974
all species →		Cellular ComponentPrp19 complexInterproscan
GO:0071011
all species →		Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSCIQP00000011563.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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