Gene detail

Detailed information of ENSCIQP00000011677.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_047126469.1, beta-mannosidase [Hydra vulgaris]
Species Millepora alcicornis · all data for this species · gene families

Sequence

CDS

Transcript

ENSCIQT00000013599

ATTCTTTCCAAGATCGAGTTACGGAAACAGTTCttgaaaagttattaaatgaCACGGTAGAAGCAAACATGAATGCATTGCGAGTATGGGGTGGTGGTATTTATGAACAAGACGAATTTTACAATCTTGCCGACAGATTAGGAATCATGATATGGCAAGATTTGATGTTTGCAGTGGCGCTGTATCCAGTGCatagaaaatttttggaaagtgtgAGAAAAGAAATACAGTACcaaGTACATCGACTTCAACACCATCCTTCAGTTATCATTTGGAGTGGTAATAATGAAAACGAAGCAGCAATTGTGCAAGAGTGGTGGCCTGAGGTAATCACTGATAAAGTTCAATACATTGCAGACTATAAAAAGCTGTATGTGGATCTCTTAAAGGAGATAATTGAAGAAGAAGACTGGAGTCGTCCTTTCATTTTGTCATCTCCGTCTAACGGTAAACTTAGCGACAAAGAAATCATTTCAGAGAACCCTCAGAGTGAATTTTACGGTGACGTTCACTATTACAATTACAATGGGAATTGTTGGGACGTGTCAATGTTTCCCGTGCCTAGATTTGCGTCGGAATATGGATACCAGTCATACCCGTCATACATTACCTTATCACAGGCCTCTGGTCCAAGTCAGTTAACATGGAACAGTTCCCTGATGTTTAGCAGACAGCATCATCAGAATGgcaataaagaaatagcaaactttataaaaatgaatttcaatctACCCTCAAAAAACATGCACCCAAacgattactttaaaaatatgatctATCTTTCACAAATTGTACAAGCACTTTGTATAAAATATGAAACCGAACACTATCGACGATGGCAAGGGAGAATTGACAGGGACGGGAAAGGGCATACAATGGGTGCTTTATATTGGCAGTTGAATGATATATGGCAAGCCCCTTCATGGTCGTCAATCGAATATGGTGGAAGATGGAAGATTCTTCACTACTACGTAAAAGAGTTCTTCAACGCAGCAGCAGTTTCAGGCTACCTTAACAATGGCATCTTATATGTGTATGCAGTGAGTGATAACCCAAACTTACTACCACCATTAAGGGTGCAGTTTTCAATACATGAGTGGTCGAGTTTCAAAAGGTTACATCATGAAGTGGTCGATGTCAAGGAGATGAATGAGAGTgtTTTGATATTTCATTCCGAAGTAATGCATTTTTGCCCTCAAAAAAACTGCTTTGTCGAGTTAAACCTTTATCACAGGGAAACAGGACTAATAATCTCAAAAACGCACGTGTTTTTACAACGATTTAATCAAGTTACTCTACAAGATCCCCAACTAAAGATAGAGTCAGTAACGCAAGTTTCCGAAGACTCTTTTGAAATTATGGTGACTTCAACTCTACCTGCTGCATTCGTTTGGCTGGAGACAGCTGTGTCaggtcatttttcaaataatgggTTTGTTATGGCGTTAGGAGGTTCTATAGTTAGATTTTACTGCGAAGAACTAATAGATATAGCACAACTGAAAAGAAGTTTGAAAGTCCAGTCTTTATATGATGTCTATCGtacataaaaacatataaagcAGCTGGATTAGCTGTTATTCCTTCCAAAGACTATACTATTAAAAAGCTtgtttgaaataaagaaagtgtgatttatttatcattatcttccGTACTTGATTGAGTGAATTATGAGTCAGTACCAGCATTGGATTTGTTGAACTTTGAATGGGTGTTTACAGCTAATATGATAAAGAGGAGATCTGGAAAAATGTTAGCACGCTTGGATGGCcagaagattttttcttgataaaggaAGATTTCTCTACCTGTCATTCCACATAAATGACAATTGAATTCATCTTGCAGGTTTCTTACATCTCATGTTTTTGGAAAAGAGAACAGAGCATcttaaatgatataaaacaataacttaaaattttgtaTGGCTCATATTGAAAGAAATTTACTTTCCAGCGACTAGCGTGTCGGGAATTGGGGAATGGGAATAAGTTCTTCACAAACAGGGATCtggtaaaaacaaaagtttagtaAACGAGCCCCTCAGAGAAtgatctaaaattgaaaaactgtgCATACTATAAAATACACAATACTTATGCTAAAGAAAGTGTTTAGAGTGTTAGAAGATAATGTTTGGTGTATAACcataagtttagtttttaaataatgtttattttCCAGTTTATCTTTTGCCCAAAAATTTAGGTATCTTTTGAAACCTGGCTCAATCTTCAAATTCTCTACGAACTGGTGTATGATCcctgtttaaatttcttaaatttattaaattgttttcttagatttagcaaaaaatatcaagtttttagaTTGCTTGAAGTTTATCAGTTTCACCCCAAATGCTTATCTTATAGATATGTTGTTTCTTTTAAGTCGATTGCTTGCTCAAATAGATTGAAATTGCCTCCTCCTCCTTTCCTGCTCCACCGCTCCCACA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O00462	Beta-mannosidase OS=Homo sapiens OX=9606 GN=MANBA PE=1 SV=3
Q8K2I4	Beta-mannosidase OS=Mus musculus OX=10090 GN=Manba PE=1 SV=1
Q4FZV0	Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003914 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02836 all species →	Glyco_hydro_2_C	Glycosyl hydrolases family 2, TIM barrel domain	Domain	Interproscan
PF17753 all species →	Ig_mannosidase	Ig-fold domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006103 all species →	Domain	Glycoside hydrolase family 2, catalytic domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR050887 all species →	Family	Beta-mannosidase glycosyl hydrolases	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR041625 all species →	Domain	Beta-mannosidase, Ig-fold domain	Interproscan
IPR036156 all species →	Homologous_superfamily	Beta-Galactosidase/glucuronidase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43730 all species →	BETA-MANNOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004567 all species →	Molecular Function	beta-mannosidase activity	Interproscan
GO:0006516 all species →	Biological Process	glycoprotein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000011677.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.