Detailed information of ENSCIQP00000013529.1 in Millepora alcicornis

Genomic Location: chr4:69981556...70023465
NR annotation: PIK45438.1, putative geranylgeranyl transferase type-2 subunit beta isoform X2 [Apostichopus japonicus]
Species Millepora alcicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P20133Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BET2 PE=1 SV=3
P53611Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens OX=9606 GN=RABGGTB PE=1 SV=2
Q08603Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006218 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00432
all species →		PrenyltransPrenyltransferase and squalene oxidase repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008930
all species →		Homologous_superfamilyTerpenoid cyclases/protein prenyltransferase alpha-alpha toroidInterproscan
IPR026873
all species →		FamilyGeranylgeranyl transferase type-2 subunit betaInterproscan
IPR001330
all species →		RepeatPFTB repeatInterproscan
IPR045089
all species →		FamilyPrenyltransferase subunit betaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11774
all species →		GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004663
all species →		Molecular FunctionRab geranylgeranyltransferase activityInterproscan
GO:0018344
all species →		Biological Processprotein geranylgeranylationInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0005968
all species →		Cellular ComponentRab-protein geranylgeranyltransferase complexInterproscan
GO:0008318
all species →		Molecular Functionprotein prenyltransferase activityInterproscan
GO:0018342
all species →		Biological Processprotein prenylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05956RABGGTB; geranylgeranyl transferase type-2 subunit betaEC:2.5.1.60
Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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