Gene detail

Detailed information of ENSCIQP00000014565.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_047132290.1, talin-2 isoform X3 [Hydra vulgaris]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

ENSCIQT00000016978

ATGGAAGAGCTTGATGAAGAAAACCCCGTATATATGAGTCTTGAGATGAGGCCCCCATCACCGAACAATGAGGAGACTGGTGAATTTGATGTGGATGCAGCACTAACGTCAATTGCTAATGCCAACGCGTCTGTCATTATGTCTTCAGAAAACTGGGACGAAGAGCGTAATATCTTATCTACCAAAAGCGCTGTAAATACCATtcTGGCAAACTTGAGAGATCTTTCACAGCATGCTCGGTTTGTTGTATCACAAATGGGAAAAAACGACGAGGAGGGTAAAGATCTATTAGATGCAGCAAGAAGATTAGCAGATGCATTTAAAGATTTGACATTCAGTTTAAGGCCAGACAACGACCAGacTAATGAGGACGTTTATGCAGCAATTAATAAAATGCAGAAGGCTAGTGATGACATGATTGGAGACAAAAAGAGCGAAAATTACAAATCCTATAGTGAGGTCCTCATTATGATGACCAAAGGTGTTGAAAAAGCCACAGAAAATTTATCTGATAAAACTCGTCAACTGGCCGATACACTTGATTTTGTTAGCGCAAACAAGTTAACAGAAGCCAGTAAAAAAGCTGAAGTAAAAGCACAACACCTGTCTATGTGCACAAAAATACTAATACCTTTTATAAATGATGGAAAATCGAAATTGCAGCTAGCCAATACGATGAAATTAGTTGGAAACGATGTGAAAGCTTTATCTGGCTTATGTACTGTCGCGACGGACGATGAcgattttaaaagtaaaatcaaggCAGCCGCTAAAGATGTAACTGATGCGCTCGATAAACTATTAGCTCAAGTTAAAACAAGTCCTAAAGATGAGAAACAACCAGTTACAGAAGAAAACATATACGAAACTATTTTAAATGCAAACGAAAAGATGATGCAAAGTTTTGAAGAGCCCGCTTCATTAGTCAAACAAGCAACCAGACTATCGGAGGCTACGAAGCAGATAATCAACGGTATGAATGCACAAGCAAATACAATGGACGATGGtacagaaagaaataaacttcTGTCAGCTGCCAAGTTATTGGCAGATGCGCAACTTGCCTTACTTGCTGCAGCCAACAGCTACAAGGAGAACCCACAAAGCCAAGAACACAGGGCCAAAGTGAAATACGCAGCAGTTAATCTCCGCTTGACTACAAACATGGCCACAAACAATGCACTAAAGAAAGCCCTAATTTTAAAACTTGAACACATCTCGAAAAAAGCATTAGGTACAGCTACACAACTTGTTGCTGCGGGTAAAGCTGCTACTCCTTATAACAATAACAGAACAGCACAACAGAAGTTCAATGAAGCGAGACAAattcttgtGACGCATAATGCCAAAGAGTTGATCTTAGCAGTGAAAGAGAGCGAAATGAAGCCTGGAAATCAAGTGGCTCAAGCTGAAATAGTTCGCGCTGCAAAGGATTTTCTACCGGTTGCGATGCGCATGGTGGAGTCTGCTAAAAACATGGAACCTAATATCGTCAAAAAACCTACTGCGATGCAACTTTCGAAAGCACGTATAGAAGCAGAATCTGCTTTCAACGAACTACAGAATGCTATTGGAAAGCTGTCAGAAGGGCAGGAAGACTGTGACGAAGCCTTGGCTGCATTAAAGAAATTAGAGCACGATTTGGATCAAGCTTCCTTAGCTGCCATTAGTGACACATTAAAACCGAACCCTAATGACAGGTTGAAGgtCTTGGAGGAAGCAATCGTGGCATCGTGTAAAGCATTAGAAGAAGAACTCCCGGAAGTAACAGAGAGCGGAAAATGTTCGGCTGAGCAAATCCCACCAAGCGTAGAAAAAACGGCGAGGATTGTCCAAAATCTAACAGACAATATGATAGCATTTGCAGCTAATTTATCTGCAGCCTCTGAAAAACAAACGGAATCGTTAGATCTAGCAAAAACCGTTGTTGAATCAGTATGGGAGTTAGTTACAGCCGTAAGGGACACAGCCGGAAATCCTCACGCAATTGATATGCATCAAACAATAGACGAGGCTAGTGACAACGTACTTGAAGCACTTAAGGACTTGATGAAGTTTGTAAATGGAACAATGGGTGATATCGACTCTATAGCATTCCTTGTGACATCCGTGGAAAATGCCAAAAACGCAATGATACGTGGAGTTGAAAGTAACGTAGTCGCTGATCAAGCATTTGTCGTATACCAAGATAAAATGGTGAAAGCACTAAAAGCTATAGCTCGAGGTGCACATGACATGGTTGGGAAAGCTCAAACCAAACCAAAAGAGCTGTCAGCAGTATCAGATGACCTGTACACAAATTTCAATACACTAGCTGATCAAACAAAATATGCTGTTGTATTAACCAATGAAGAGCTTGGCAAGGAACTGATAGCTAACGTTCAAGAATTAGGTAATTCTTGCAGTTCCTTAATTAATTCTGCAGGCCAATTTCAAGTAAGCTCCGATGACTTTAATGCAAGGCAGAGTCTCTCAGACACAGCAAAGGATGTTTCTGTACAAGTAGCCAAGGTCTTGTCAAATTTACAGAGAGGCTCTGTTGGTACACAACAGTGTATTAACGCTGTCAGCTACCTGGATGGTCTCATTGGTGATATTGACACAACTGTCATGTTTGCACATGCCGGTACGTTAGATCCAGAGGATGATAAGCAATTTCCAGAACATAAGGAAAACATTCTGAACAATGCACAGAAGCTTTTGTTAGATACCAAAGCGCTAGTAGCGTCAGCACAACAGTCTCAAGAACAACTGGCTGGGTCTGTAACTGAAGTATTGAAGAGTTCTACTAAGCTCATTGATAGTGTAAAACTGGGCTCGTCTGCGTTAGGAAATGAAGATAAAAACGGACAGATCTTATTGCTTAATGCTGTGAAGGACGTTGCTAAAGCTATGTCGGAGCTAATAAATAACACCAAAATTGCAAGTGGGATGCCAGCAGATCATCTAGCTACCGAAGATTTGAATAGTGCTGCAAAG

Transcript

ENSCIQT00000016978

GTTGGTTATATCTCGGGAAGTTTTTCTCCTGCGAAAAAGGCATTACTCACAGATCTTGATGATAGTGGACGCGCTGTGATTGTGTTAATGGAAGAGCTTGATGAAGAAAACCCCGTATATATGAGTCTTGAGATGAGGCCCCCATCACCGAACAATGAGGAGACTGGTGAATTTGATGTGGATGCAGCACTAACGTCAATTGCTAATGCCAACGCGTCTGTCATTATGTCTTCAGAAAACTGGGACGAAGAGCGTAATATCTTATCTACCAAAAGCGCTGTAAATACCATtcTGGCAAACTTGAGAGATCTTTCACAGCATGCTCGGTTTGTTGTATCACAAATGGGAAAAAACGACGAGGAGGGTAAAGATCTATTAGATGCAGCAAGAAGATTAGCAGATGCATTTAAAGATTTGACATTCAGTTTAAGGCCAGACAACGACCAGacTAATGAGGACGTTTATGCAGCAATTAATAAAATGCAGAAGGCTAGTGATGACATGATTGGAGACAAAAAGAGCGAAAATTACAAATCCTATAGTGAGGTCCTCATTATGATGACCAAAGGTGTTGAAAAAGCCACAGAAAATTTATCTGATAAAACTCGTCAACTGGCCGATACACTTGATTTTGTTAGCGCAAACAAGTTAACAGAAGCCAGTAAAAAAGCTGAAGTAAAAGCACAACACCTGTCTATGTGCACAAAAATACTAATACCTTTTATAAATGATGGAAAATCGAAATTGCAGCTAGCCAATACGATGAAATTAGTTGGAAACGATGTGAAAGCTTTATCTGGCTTATGTACTGTCGCGACGGACGATGAcgattttaaaagtaaaatcaaggCAGCCGCTAAAGATGTAACTGATGCGCTCGATAAACTATTAGCTCAAGTTAAAACAAGTCCTAAAGATGAGAAACAACCAGTTACAGAAGAAAACATATACGAAACTATTTTAAATGCAAACGAAAAGATGATGCAAAGTTTTGAAGAGCCCGCTTCATTAGTCAAACAAGCAACCAGACTATCGGAGGCTACGAAGCAGATAATCAACGGTATGAATGCACAAGCAAATACAATGGACGATGGtacagaaagaaataaacttcTGTCAGCTGCCAAGTTATTGGCAGATGCGCAACTTGCCTTACTTGCTGCAGCCAACAGCTACAAGGAGAACCCACAAAGCCAAGAACACAGGGCCAAAGTGAAATACGCAGCAGTTAATCTCCGCTTGACTACAAACATGGCCACAAACAATGCACTAAAGAAAGCCCTAATTTTAAAACTTGAACACATCTCGAAAAAAGCATTAGGTACAGCTACACAACTTGTTGCTGCGGGTAAAGCTGCTACTCCTTATAACAATAACAGAACAGCACAACAGAAGTTCAATGAAGCGAGACAAattcttgtGACGCATAATGCCAAAGAGTTGATCTTAGCAGTGAAAGAGAGCGAAATGAAGCCTGGAAATCAAGTGGCTCAAGCTGAAATAGTTCGCGCTGCAAAGGATTTTCTACCGGTTGCGATGCGCATGGTGGAGTCTGCTAAAAACATGGAACCTAATATCGTCAAAAAACCTACTGCGATGCAACTTTCGAAAGCACGTATAGAAGCAGAATCTGCTTTCAACGAACTACAGAATGCTATTGGAAAGCTGTCAGAAGGGCAGGAAGACTGTGACGAAGCCTTGGCTGCATTAAAGAAATTAGAGCACGATTTGGATCAAGCTTCCTTAGCTGCCATTAGTGACACATTAAAACCGAACCCTAATGACAGGTTGAAGgtCTTGGAGGAAGCAATCGTGGCATCGTGTAAAGCATTAGAAGAAGAACTCCCGGAAGTAACAGAGAGCGGAAAATGTTCGGCTGAGCAAATCCCACCAAGCGTAGAAAAAACGGCGAGGATTGTCCAAAATCTAACAGACAATATGATAGCATTTGCAGCTAATTTATCTGCAGCCTCTGAAAAACAAACGGAATCGTTAGATCTAGCAAAAACCGTTGTTGAATCAGTATGGGAGTTAGTTACAGCCGTAAGGGACACAGCCGGAAATCCTCACGCAATTGATATGCATCAAACAATAGACGAGGCTAGTGACAACGTACTTGAAGCACTTAAGGACTTGATGAAGTTTGTAAATGGAACAATGGGTGATATCGACTCTATAGCATTCCTTGTGACATCCGTGGAAAATGCCAAAAACGCAATGATACGTGGAGTTGAAAGTAACGTAGTCGCTGATCAAGCATTTGTCGTATACCAAGATAAAATGGTGAAAGCACTAAAAGCTATAGCTCGAGGTGCACATGACATGGTTGGGAAAGCTCAAACCAAACCAAAAGAGCTGTCAGCAGTATCAGATGACCTGTACACAAATTTCAATACACTAGCTGATCAAACAAAATATGCTGTTGTATTAACCAATGAAGAGCTTGGCAAGGAACTGATAGCTAACGTTCAAGAATTAGGTAATTCTTGCAGTTCCTTAATTAATTCTGCAGGCCAATTTCAAGTAAGCTCCGATGACTTTAATGCAAGGCAGAGTCTCTCAGACACAGCAAAGGATGTTTCTGTACAAGTAGCCAAGGTCTTGTCAAATTTACAGAGAGGCTCTGTTGGTACACAACAGTGTATTAACGCTGTCAGCTACCTGGATGGTCTCATTGGTGATATTGACACAACTGTCATGTTTGCACATGCCGGTACGTTAGATCCAGAGGATGATAAGCAATTTCCAGAACATAAGGAAAACATTCTGAACAATGCACAGAAGCTTTTGTTAGATACCAAAGCGCTAGTAGCGTCAGCACAACAGTCTCAAGAACAACTGGCTGGGTCTGTAACTGAAGTATTGAAGAGTTCTACTAAGCTCATTGATAGTGTAAAACTGGGCTCGTCTGCGTTAGGAAATGAAGATAAAAACGGACAGATCTTATTGCTTAATGCTGTGAAGGACGTTGCTAAAGCTATGTCGGAGCTAATAAATAACACCAAAATTGCAAGTGGGATGCCAGCAGATCATCTAGCTACCGAAGATTTGAATAGTGCTGCAAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P54939	Talin-1 OS=Gallus gallus OX=9031 GN=TLN1 PE=1 SV=2
A0A3G2LGI8	Talin OS=Oscarella pearsei OX=1940113 GN=TLN PE=1 SV=1
Q9Y490	Talin-1 OS=Homo sapiens OX=9606 GN=TLN1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002127 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08913 all species →	VBS	Vinculin Binding Site	Domain	Interproscan
PF21692 all species →	Talin_R4	Talin, R4 domain	Domain	Interproscan
PF09141 all species →	Talin_middle	Talin, middle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035964 all species →	Homologous_superfamily	I/LWEQ domain superfamily	Interproscan
IPR036723 all species →	Homologous_superfamily	Alpha-catenin/vinculin-like superfamily	Interproscan
IPR015009 all species →	Domain	Vinculin-binding site-containing domain	Interproscan
IPR036476 all species →	Homologous_superfamily	Talin, central domain superfamily	Interproscan
IPR049108 all species →	Domain	Talin, R4 domain	Interproscan
IPR015224 all species →	Domain	Talin, central	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19981 all species →	TALIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0005178 all species →	Molecular Function	integrin binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005925 all species →	Cellular Component	focal adhesion	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0001726 all species →	Cellular Component	ruffle	Interproscan
GO:0005200 all species →	Molecular Function	structural constituent of cytoskeleton	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000014565.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.