Gene detail

Detailed information of ENSCIQP00000014735.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_047134866.1, transcription initiation factor TFIID subunit 2-like isoform X2 [Hydra vulgaris]
Species Millepora alcicornis · all data for this species · gene families

Sequence

CDS

Transcript

ENSCIQT00000017170

AGGCGAAGAGGTTGACATGGATTTAAATGCAACAATGGATACTGATTCACCTGTATTATGGATCCGAATAGATCCTGACATGACTTGGTTGCGTACAGTTACTTTGCAGCAACCCGACTACATGTGGCAGTACCAGTTACGTTATGAAAGAGATGTCGTCTCGCAAATCGAAGCAGTACAAGCTTTATGTAAATATCCATGCCCAGGCACAAGGTCTGCCTTAGTCGATATCATCAACCAGAATGAAGCATTTTATAAAGTTCGATTGGAGTCTTGTGATAGTTTAGCCAAGATTTGCACTGAAGAGACAGAAGTCTGGGATGGTGAATTAAAAAtgctggaaatatttcaaaaaatgtttggctCTAGTTCTCATCATAAGATTCCTAAAttcaatgatttttcaaattttatctcatattttttgcaaaagCACATGCCTGTGGCTGTATCGTCAATTAGGAATAAACATTCACAGTGCTCACAAAGAGTGGTCACATTCATCTTAGATTTAATCAAATATAATGACAACAGATTCAATCAAtatttggACAGCTACTACATGAGTTCGCTGATAGATGCTTTGTCAAATACTATTGGCCCCGCAATTCAGCTGGCTTCCTCAGTTGACTTATTGGACAGGGCTTCTTTACCAATTGATGAGGATGCCAAgGCAGTCTTATCAGTTGTAAATAGAAGTTTGAACATGGACAAGATATTACCATCATATCGATACGTTGTATCATGCAGttgtttaaaagcACTCAGGTCACTTCAAATAAATGGACATATTCCTGCCGAATCAGCTTTCTTCAAACATTACGCAAGGTACGGAGTCTTTGAAGACGTTAGATTGACAGCGTTGGAAATTATGGTGGATTTTATATTCGCTCATCATAGCGAGAAAGATCTGGAATGGTTGTTAGATTTGATAGAGCGAGATCCAGTTCCTTATATTCGACATCAAGCAATACAGTATTTGGTAGAAAAACCGCCATTTACCAAGAAAACAAGCAACTCGCCTTTAAACAACCAGATATTAGTTGAACGGATATGGCAATTAATGAACTATGATTCAGTCAATGATTTTCGATTGCGATGTGATTTGATGGAGTTATACAATGCATTATGGGGAAGGGTGACACCCAACTGTGTGCCAGCACATGGgGTTGGTGTTGTGATTGATTTGAAGGAAAAACGTGCAGTGCCTAATACTTCATCATACCCTGTGCTAGGTTCTCCAgATGTCAGTGCATCAGTAAGTGCTGGGGAGGAACCGTATTCAAAGAAACGTAGATCCTCATATAGCCATTCACCAAATCCGTACGGAGATTATATTGATTCAAAACCAGGAACTCCTATGAGCGTGAATTCCGAGATGTCAGCCGCTAGTAAActcaaattgaaaattaaatttaacGAAGAAAACAGTCATGATAGTGGCAGCGATATGGTTCCATCTTCAATGAATCAGTCGCAATCAAATCTTCAAGATGATCTAGAAAGttccaaaaaagtgaaaaagaagaaaaaaaagaaacataaaaaggataaaaaagacagaaataaaacagattttttcccAACTGGTATTCCAGGAActcatataaaatcattagatgaTAGACTTGCAGAAGTAGATTCATCACCAAATATAATGGAGTCAAATCAAAGACAGCCTTTAATGCATGATATTCATGAAcatgaagaaaatgaatttagttttgATGCAAACTTTAAGCAAGAAATTTCTGATATTGATATTAGTCCAAGACATGGTATGATTGGGGAGGATAATATAATGTTGTCAAATGAGGACGTCGTTATGGGAGGCAGGGAGAATCGTTATAGGGAAGAACCTGTCATTGAATATATGAAAAGCGAGGATGAAGATTCAGATATTAGTATATAAAACTAGAGGCTTATTCAGGactttgtcaaacatttaagatggatgAATTTTTGAGATTAGTTAGtgactaaaagtcgttaactattttcgcaaaaatctccatcctagatgtttaaGATGTTTCTAAATACGCATCTTTAGAGTcgtgtttttgcaaaatattttgcgtgAAATAGATGCTGGCTGAAATCAGAATGCTTTTTCTAAAGTTTAAGACCAGTCAAACTATTCTGCAAAAACTTCAGTGAAAGCGTCGCTTAACGGTTATAACCTCAAAATACCTAAAATCATATTAAAGCGAAAATAGAAGCTTCTTTTACGTTTCTTTGTGCCGTCACCAAAGTATTTACCGAGAGAGtttatacttttataaaattgaggtacCACAAAACCATTTGCTCAATTTCCGCGCTCACAGGGTCGATGATGCCGAGAACGCTAATTCACTCACTATGATAGGCAATAGTTACTATGATAGAAAGTACCAAACCTTTTGACAGTAGGCATCTACTAAGCGGTATCGTCGCATATTACTGTGAAGACAGGGTCTACAGAATATTTTTATGTTCAGTCTAGATTACACTAACGCTGTAGTATATTTGATTAGCTTTTATAGGGCAGGCATATTTTTCAACAGTAGTATTTTTCAGGAAGTAGTTTTATTGCGCGAAATATTACGCCAAACCTTAAAGAGAAATGTAACTGTACTTCTGCGTGTAAAAGACAGTGGAAAATTATCATCTTGTATTGTCCGGTCTTACTTTTGTGTCACTTAAATTTGTGTCAGTATTGCTggtaaaaagaaactatttattttacggatttttaaacaaattaacttttagaaaagaaatttttaacatgCATTCAAGTTATGTCTTTGTGTTTATTCATTTCCTGGAATGTGTATGGCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZIT8	Transcription initiation factor TFIID subunit 2 OS=Gallus gallus OX=9031 GN=TAF2 PE=2 SV=1
Q6P1X5	Transcription initiation factor TFIID subunit 2 OS=Homo sapiens OX=9606 GN=TAF2 PE=1 SV=3
Q8C176	Transcription initiation factor TFIID subunit 2 OS=Mus musculus OX=10090 GN=Taf2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002730 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSCIQP00000014735.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR037813 all species →	Family	Transcription initiation factor TFIID subunit 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15137 all species →	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006367 all species →	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0016251 all species →	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000014735.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.