Gene detail

Detailed information of ENSCIQP00000016342.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_047134303.1, bromodomain-containing protein 3 isoform X3 [Hydra vulgaris]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

ENSCIQT00000019206

ATGCCaccaaaaagagagaaaaaaggaAGAAGCACAAACCAGttgcaatttcttttgaaaactgttatGAGACAACTCATAAAACATCAATTTGCTTGGCCATTTACTAAACCAGTCGATGCAGTTAAATTAAGGATTCCAGATTATTATGAAATCATCAAGCAGCCCATGGATTTCGGGACAGTCAAGAAAAAATTGGAACACAATGATTACCAGAAGGCTGAAGACTGTATAAAGGAGTTGAGATTGGTTTTCTCAAACTGCTACCATTATAACAAGCCTGGAGAGGATGTTGTTATTATGgcagaagtattagaaaagttctTAAATGAAAAACTGGCTATGATGCCTCCAGAAGAATACGAAGTAACTACTGGAAAGAACAATCGAACAGTTACTGTAAAACCAGCAACATCTACAAGCAACACTGGTGAACCAAGTGAACCACCAGccaaaaagggtaaaaaaacGCCAGCAAAAACAAGATCCATAGCACCAGATACAACGCAGCCTTCACTAGTTTCTCCTCCTACAACTCTTGCACAACCAGCTCTATCACCTCCAGAACTCACAAAAAGAACTGACATATCGAGTCCCTCGTCGTCTAAAGTTTCGTCAACTGTTCCTTCAGCTTCACCTCCAGATATTGCTCCAACAAAACTACCAAACAGGACAATAAAGACTggtgtcaaaagaaaaaaagcagacaccACAACTCCAGGACCTGCTGTTCTCTCAATGGGAGAAAATAGTGAACATCCTGCGAAAATACCTTTACGTAGGGAATCCTCTAATAGAACAATAAAAAAGCCTGTCAGGGAGTTACCTGGAGAACAAGATCCCGTAATTcCACAGCAAGGCAAGAAAAAATCTAAACTATCTGAACAACTGAAATACTGTAATatgttaataaaagaaatgttttcgaAAAAGCATGAATCATATGCTTGGCCTTTTTATAAACCAGTGCAAGTAGAAGAACTGGGTTTACATGATTATCATGACATCATCAAGCAACCTATGGATCTCACCACAATAAAAACAAAAATGGAAGCTCGTGAGTATGCTACTCCTCAAAAATTCGCCAGTGATATTcgcttaatattttcaaattgttatAAATATAACCCACCAGATCATGATGTTGTCAAAATGGCTCGTAAGTTACAAGATGTTTTcgaaataaaatatgcaaaaatgccAGATGAGCCGGATACTCCTGTTGAGCAACCGGCACCTGCATCTGGAGCAACAACAACTAGTaatatatctacaaaatcaaCTCGCTCATCCAAAAACACTAATAAATCAGACTCTGAAGAAGATTCAGAGGAAGAGGAAGATTCTAGTGAAGAATCAGAGGACAGTGAGGCAGAACGTAAACGTAAACTCTCAGAATTAGAAGCACAACTTATATCTGTAcatgaacaattatctaaattaacaaaagttgaaaaagaacgGAAAGCGGAAAAAgctaataagaaaaagaaaaaggataaaaaggaCAAACCGAAACCAACTGATAAAAcgaataaagatactaaagataaaaacgtgGCTGGAAAAAGCGAGAAAtcgaaaagcaagaaaaaagataaaaaagaacgtAAGAAGACTCCTACTGAGTCTTCCTCGCAAGATTCTCCCATGAAACCACCCTCATCGAAATCCgaaaagaaaaaagctgaaaaaagtaaAGGAACTTCAAAGAAGAAATCAGCATCGGAAAGGACGAAAAAAAGCAAGATTGCTGCTAAAAAAGGTGAACTACCTGgtgatagtgatgatgaagaTCATATCCGCGCGATGACCTATGACGAAAAAAGGCAACTTAGTCTAGATATCAACAAGCTTCCAGGTGATAAATTAGGCAAAGTTGTGCATATTATTCAAACGAAAGAACCAGATTTAAAAGGAAACAATCCAGACGAAATCGAAATCGATTTTGAAACATTGCGACCTGCAACTTTACGGGAGcttgaaaaatatgtaaattcatgtgtaaagaaaaagaaagctcctgtaaaaaaaccaaaaaataatgaagatcgAGAAGCTTTGCAAGCGAAAAAGAAAGAGGAGTTAGAAAAACGCTTACAAGATGTCAGTGGTAAACTGCAAGCTGTTGCACCCAAGAAGTCGAAGAAATCGAGTAAAAAAGATGCTTCAGCTTCTGGTGAGCCAAAATCTTCCCGCCTTTCTGAGAGTAGCACTTCAAGTGGTAGTAGTAGTACTTCGACATCGGGTTCAAGTAGTGGTTCAAGCTCTGATAGCAGCTCAGATTCTGAAAAAGAAGATAAAACAGCAGCACCTACGAAAGCGGCAGCTGCTAAAGAAGAAAAGgtcaaacaagAGGCGGTAATCGAAAAAGATAGTGTTGTAAGTGCTCCCATGGCTGCACCAAAACCTCCAAtttcCATTTCATCAGTTATTGGTGCTGCAGCGCCTGTCATAAAAGAAGAATCAGATCTTGAAAAAATGTCAGAACCTCCACCAATGCAGCCTGCACCAACACACCAAATGCCTATTCCTCAAGAGAAAAAACCTGAAGAAAAACCTATTCCGACATTAACTCATATAAATGCtacgaaaaagaaaaatactcaaGTTCCATTACAAATACCAACACTTGGGCCAGCCGCACAAGCAATCACACCAACTCCGAAACCGAAAACACCGAATTCAACAACTCCCACTCAAGCCAATGCAAACCCATTTAGTCGAGgcttgcccaatatttcaagtgGTGTTACTCCAGCTAATCTCTTAAAGTCTAGCACAAATAATAATCCAAATATTAATGGTAAAGATAATAAACTTTCGTTCGGTATGGTTGATGATAGCCTGATAGCTAGTACAATAACAACACCTAAGACagGTGGTGTCAATGATGCATACAACAGACAAGCTTCCCCTGCTGATGCAGCTAACAAACCTGCGTTGAAGCACATGAGTTCATGGGGCGCCAAACAAACTCCATCTCATGCAGGAGGGAAGGCCAGTGGCACTCTCAGCAAATCTTCAAGTTTTGAACAGTTTCAAAAGTTAgcgaaagaaaaagaagaaaagGAACGTGTGGTGAAACAAGCTGAGGAACAAAAACGGCGACAAAAGGAACGCGTGGAGCAAGACCGTCAAAAAATGATTGATGAAAAGAAGCGCGAAAAAGAAGAGGAAGAAGCGCTGGAAAATGCACGCCGAAAACAAGAAGCAGAACGATTGCAGCAAGACGATATTGACAAAAAGAAACGTGAAATGGAAAGAAGAAAGGAACAAGAGAGGAGGAAAAGACAAGCGCTTGCAGGAACTGTTGATATGACGTATCAAAGTGACGTAATGGGGAATTTCGAAGCGACCTTGTAA

Transcript

ENSCIQT00000019206

CGGTCctcaattttattaaatgaatttcGATGCAGTTTTGTTAAGTTTCAGTTGCCATTATTTTGTTAGGGTAgaaatagaaagatatatagTATAAATGgcatttaagaatgaatatagGTAGTAATATGAtatttggtgaaggtaaagaccCTGGAAATGCCaccaaaaagagagaaaaaaggaAGAAGCACAAACCAGttgcaatttcttttgaaaactgttatGAGACAACTCATAAAACATCAATTTGCTTGGCCATTTACTAAACCAGTCGATGCAGTTAAATTAAGGATTCCAGATTATTATGAAATCATCAAGCAGCCCATGGATTTCGGGACAGTCAAGAAAAAATTGGAACACAATGATTACCAGAAGGCTGAAGACTGTATAAAGGAGTTGAGATTGGTTTTCTCAAACTGCTACCATTATAACAAGCCTGGAGAGGATGTTGTTATTATGgcagaagtattagaaaagttctTAAATGAAAAACTGGCTATGATGCCTCCAGAAGAATACGAAGTAACTACTGGAAAGAACAATCGAACAGTTACTGTAAAACCAGCAACATCTACAAGCAACACTGGTGAACCAAGTGAACCACCAGccaaaaagggtaaaaaaacGCCAGCAAAAACAAGATCCATAGCACCAGATACAACGCAGCCTTCACTAGTTTCTCCTCCTACAACTCTTGCACAACCAGCTCTATCACCTCCAGAACTCACAAAAAGAACTGACATATCGAGTCCCTCGTCGTCTAAAGTTTCGTCAACTGTTCCTTCAGCTTCACCTCCAGATATTGCTCCAACAAAACTACCAAACAGGACAATAAAGACTggtgtcaaaagaaaaaaagcagacaccACAACTCCAGGACCTGCTGTTCTCTCAATGGGAGAAAATAGTGAACATCCTGCGAAAATACCTTTACGTAGGGAATCCTCTAATAGAACAATAAAAAAGCCTGTCAGGGAGTTACCTGGAGAACAAGATCCCGTAATTcCACAGCAAGGCAAGAAAAAATCTAAACTATCTGAACAACTGAAATACTGTAATatgttaataaaagaaatgttttcgaAAAAGCATGAATCATATGCTTGGCCTTTTTATAAACCAGTGCAAGTAGAAGAACTGGGTTTACATGATTATCATGACATCATCAAGCAACCTATGGATCTCACCACAATAAAAACAAAAATGGAAGCTCGTGAGTATGCTACTCCTCAAAAATTCGCCAGTGATATTcgcttaatattttcaaattgttatAAATATAACCCACCAGATCATGATGTTGTCAAAATGGCTCGTAAGTTACAAGATGTTTTcgaaataaaatatgcaaaaatgccAGATGAGCCGGATACTCCTGTTGAGCAACCGGCACCTGCATCTGGAGCAACAACAACTAGTaatatatctacaaaatcaaCTCGCTCATCCAAAAACACTAATAAATCAGACTCTGAAGAAGATTCAGAGGAAGAGGAAGATTCTAGTGAAGAATCAGAGGACAGTGAGGCAGAACGTAAACGTAAACTCTCAGAATTAGAAGCACAACTTATATCTGTAcatgaacaattatctaaattaacaaaagttgaaaaagaacgGAAAGCGGAAAAAgctaataagaaaaagaaaaaggataaaaaggaCAAACCGAAACCAACTGATAAAAcgaataaagatactaaagataaaaacgtgGCTGGAAAAAGCGAGAAAtcgaaaagcaagaaaaaagataaaaaagaacgtAAGAAGACTCCTACTGAGTCTTCCTCGCAAGATTCTCCCATGAAACCACCCTCATCGAAATCCgaaaagaaaaaagctgaaaaaagtaaAGGAACTTCAAAGAAGAAATCAGCATCGGAAAGGACGAAAAAAAGCAAGATTGCTGCTAAAAAAGGTGAACTACCTGgtgatagtgatgatgaagaTCATATCCGCGCGATGACCTATGACGAAAAAAGGCAACTTAGTCTAGATATCAACAAGCTTCCAGGTGATAAATTAGGCAAAGTTGTGCATATTATTCAAACGAAAGAACCAGATTTAAAAGGAAACAATCCAGACGAAATCGAAATCGATTTTGAAACATTGCGACCTGCAACTTTACGGGAGcttgaaaaatatgtaaattcatgtgtaaagaaaaagaaagctcctgtaaaaaaaccaaaaaataatgaagatcgAGAAGCTTTGCAAGCGAAAAAGAAAGAGGAGTTAGAAAAACGCTTACAAGATGTCAGTGGTAAACTGCAAGCTGTTGCACCCAAGAAGTCGAAGAAATCGAGTAAAAAAGATGCTTCAGCTTCTGGTGAGCCAAAATCTTCCCGCCTTTCTGAGAGTAGCACTTCAAGTGGTAGTAGTAGTACTTCGACATCGGGTTCAAGTAGTGGTTCAAGCTCTGATAGCAGCTCAGATTCTGAAAAAGAAGATAAAACAGCAGCACCTACGAAAGCGGCAGCTGCTAAAGAAGAAAAGgtcaaacaagAGGCGGTAATCGAAAAAGATAGTGTTGTAAGTGCTCCCATGGCTGCACCAAAACCTCCAAtttcCATTTCATCAGTTATTGGTGCTGCAGCGCCTGTCATAAAAGAAGAATCAGATCTTGAAAAAATGTCAGAACCTCCACCAATGCAGCCTGCACCAACACACCAAATGCCTATTCCTCAAGAGAAAAAACCTGAAGAAAAACCTATTCCGACATTAACTCATATAAATGCtacgaaaaagaaaaatactcaaGTTCCATTACAAATACCAACACTTGGGCCAGCCGCACAAGCAATCACACCAACTCCGAAACCGAAAACACCGAATTCAACAACTCCCACTCAAGCCAATGCAAACCCATTTAGTCGAGgcttgcccaatatttcaagtgGTGTTACTCCAGCTAATCTCTTAAAGTCTAGCACAAATAATAATCCAAATATTAATGGTAAAGATAATAAACTTTCGTTCGGTATGGTTGATGATAGCCTGATAGCTAGTACAATAACAACACCTAAGACagGTGGTGTCAATGATGCATACAACAGACAAGCTTCCCCTGCTGATGCAGCTAACAAACCTGCGTTGAAGCACATGAGTTCATGGGGCGCCAAACAAACTCCATCTCATGCAGGAGGGAAGGCCAGTGGCACTCTCAGCAAATCTTCAAGTTTTGAACAGTTTCAAAAGTTAgcgaaagaaaaagaagaaaagGAACGTGTGGTGAAACAAGCTGAGGAACAAAAACGGCGACAAAAGGAACGCGTGGAGCAAGACCGTCAAAAAATGATTGATGAAAAGAAGCGCGAAAAAGAAGAGGAAGAAGCGCTGGAAAATGCACGCCGAAAACAAGAAGCAGAACGATTGCAGCAAGACGATATTGACAAAAAGAAACGTGAAATGGAAAGAAGAAAGGAACAAGAGAGGAGGAAAAGACAAGCGCTTGCAGGAACTGTTGATATGACGTATCAAAGTGACGTAATGGGGAATTTCGAAGCGACCTTGTAAAATACAGAACAACTGAAATACTACTAGGGGACGGAGAAAATAGACAGGGGTTGGAAAAAGCTGGCTGCGTCAAAGTTCATTTTGAAATCTTGTTTATATTGCTAAAGATAAGACATTTTGACGGAAGGATTGCCAAATTTCcatgtacatatatttttaaaattatacggtCTTGCAAACTTACTCTTAGAGAGTCTTTCATTTTTGACTGAAGTTGCAACGGAGAAGGAAATACCCACTAAGAATGAGTTTGCCAGCGGCAAAGTTTTCATTTCATTAGGCGGATGGAAGAAAACTaagacttgtaaaaaaatatcttagtttTTACAAGTGTcagattaattttacaaaacatttttgagtagAAATCCAGAAAGCTACACTCTTGAATAACACCTGGGAAGGAGTATGCTTTAGTAGAGTTGTAAGTCCATTGGTCATTGGCTTAGAGCTTTGTTGAAAGTGAAACCTTTCTCGGATGTTCTACAAGAGGATTGTTTTTTGCGCAATGTGATGTGGAGTTTAAcgctttgtttattattttgttactatTGTATCACTTGTAAGAAATTTAatgtcatctttttttgaaaaccaattgaaaaaaatctttaaattaatatA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P25440	Bromodomain-containing protein 2 OS=Homo sapiens OX=9606 GN=BRD2 PE=1 SV=2
Q32S26	Bromodomain-containing protein 2 OS=Bos taurus OX=9913 GN=BRD2 PE=3 SV=1
Q5TJG6	Bromodomain-containing protein 2 OS=Canis lupus familiaris OX=9615 GN=BRD2 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002591 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00439 all species →	Bromodomain	Bromodomain	Domain	Interproscan
PF17105 all species →	BRD4_CDT	C-terminal domain of bromodomain protein 4	Family	Interproscan
PF17035 all species →	BET	Bromodomain extra-terminal - transcription regulation	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036427 all species →	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR050935 all species →	Family	Bromodomain-containing chromatin reader	Interproscan
IPR001487 all species →	Domain	Bromodomain	Interproscan
IPR018359 all species →	Conserved_site	Bromodomain, conserved site	Interproscan
IPR027353 all species →	Domain	NET domain	Interproscan
IPR031354 all species →	Domain	Bromodomain protein 4, C-terminal	Interproscan
IPR038336 all species →	Homologous_superfamily	NET domain superfamily	Interproscan
IPR043509 all species →	Domain	Brdt, bromodomain, repeat II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22880 all species →	FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000785 all species →	Cellular Component	chromatin	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0070577 all species →	Molecular Function	lysine-acetylated histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000016342.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.