Gene detail

Detailed information of ENSCIQP00000016644.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_047135611.1, ER degradation-enhancing alpha-mannosidase-like protein 3 [Hydra vulgaris]
Species Millepora alcicornis · all data for this species · gene families

Sequence

CDS

ENSCIQT00000019545

ATGCTGGTTGATGTTTTAATGAATGAACCCTTGAAGAAAATCAGATCTCATATGGATGCGCTACAAGCATTTTGGCCTGGGTTGCaggtTTTGAAAGGAGACTTGCAGTCTGCTATTGAAACGCATGAAATGTTGTACACAGTCGCTAAAAAGTTCAAGTTTTTACCCGAGGCATTTACAACAGATTTCAACGTACATTGGGCACAACATCCTTTACGGCCAGAGTTTGTTGAAAGCACTTATTTCCTCTATGAGGCCACCAAGGATCCGCACTACTTAAATGTTGGGAAACATGTTATCGAATCACTAGAAAATTATGCAAGAGTTGCATGTGGATTCGCTGCTTTGAAAGACCTAAGAACATTGTCGCACGAAGATAAAATGGATTCATTCGTGCTGGCGGAAACGTTCAAATACTTGTATCTATTATTTTCGGAGGAATCAGAGCGTGAAATAAATATTCACGATTATGTTTTCACAACCGAAGCACATCTACTACCATTATATTTATCAACTGTTCCCAGTGACAAGACGGACAATGACACAACAGAAAACGAGAAtCCTGTCAATGAGCTTCGTGGTTTTTCTCTACGTCTTGATGAAGATTTACCTTCTTGTCCAAACCATCGTCATGGAATAAACGATATGTTATCGTTTGCACGGAAAGTTAGGAAGAATGTAAAAAACTCTATCCCGTCACATCAAACGCAACCCATATGTTCTAATCAACCGCCCGTTGTATCAGCTAAAATTGTGAATgaaaaagattcagaaaaaatacTTTCAGTCATCAAAATTGCAAGTAACCGTGAACGTAAGTTGAAAGCAGACCAATTCATTATGGACAACCAGGAGCActtgaaaatactgaaagattTTGGGATATCAATTCATAAAGGGGATGATGGGAAAGTGCAGTTAATGCACCAGGCTGCTAATGCTGCCACAGGAGCAGATGCGGAAGAAGGGTTATTGTTCATGAAAGAAATGATAGAATTATCCAAACAGAAAGGAACAATTGCGgTTGAGACAAATCCACGAGTTGTACAACTGATGTCTCCACCATACAAAGGAAGTATAGTGCTTACTGCTGGCTCAGCACAATTTGGAGCAGATCTTACAAACAATAAAGAAGGGTTATTAGCAGAAGTTGTTGAAGGTGACCCATTCCGTGCATGTGGAACcattaaaaatggagaagaaataaaaaatcgtaTCGTGCTGATTGAAAGAGGCGAATGCATGTTCATCGACAAGGTTCGTCTAGCGCAAGGAGTAGGGGCGTTGGGTGTAATTATAATAGATCATACTGAAGGCACATCCATTGAAACATCCCAGCAATTTTCTATGAGTGGTGACAGTAATCCTGAGGATGTACATATCCCTAGTGTGTTTCTCTTTAAGAAGGAGGGGGATTTACTACGCCAGTTTATGAAATCTGTTGAAGGGAAAATGCAAGTGAGAATAGCGGCCAAAGCAGTGCGTGAAAAAGAAGACGAGAAACAGGAGTCAACCGAGCAAGGAAAGACTGATACCGATGATAATGCAAGTACTTTAAAGGAAACATTAACcagtaaattattgaaaaatcaggACAAATTCGACAAGGCAGATAAGCAATTGGTACACATTAACGAGGATGGGAGTAAGaGTATTACCACGATATCTTCATTCATTGGCCCAAATGATAACAacgtaatgaaaaaatatattcagaaaaaaattgaaacgtgTCCAACTTCTGAGTGTAACCATGGAGTacaaacaaaatatgaatttagTACGGAGGATGCAGTTACAGAAACGACGGCAGATAcagaatcaaaagatattgctAAACCTAAAACTGATCAATCAAACGatgaaaattatatagaaaattttttttctaaagcattAAATGCAAAAGCTAACAAAGATGGTTCAATATGCACATCTGCTGGGTGTTTTGAAAGCTCAGAAGAGCATGATAAAATGAATTCCCTAGCAGATGGAATATTAGATAGTTTAAAACAACTGCAGAATAAACTGGAATCCAGTGTTGTAAACTTGCTTGATGAAATACGTGATAAACATAAAGATATAAATCATCCAAAAGCAAAACAAGAGTTTGAGAAAATTCGCCAGTTTCTAAATAATGAACAAGCAGCACAAGTGTTGCATGGTGGAGATACTGAGCAGCAAAATAGAATCCAGAATgcgaaagaaaatttaaaagaaccaactattgttattgagaaaaacaaagaaaatgaaaaaaaagcatataAAGATGAATATAAAGCTGCGCCAAATGCGGATGATACTTTAGCTAGCGAAAAGCAATTAACTATTACAGAAGACACAAATAGTGGAACAGAAACTATAAAAGGAAATGTTTCTGATAATGAAGCTGAACTAAATAAcgtaaaaaattcaacaaataaagaaaagtcAAATAGTAAACAAGACTCGGATATAGAAGATGATGTAGATCCAAACACGAGGACGAGAGAGGACTTATAG

Transcript

ENSCIQT00000019545

CACTATGCCGCAATTAACAGATATGTACGTAATGGTTTCATGCTGGTTGATGTTTTAATGAATGAACCCTTGAAGAAAATCAGATCTCATATGGATGCGCTACAAGCATTTTGGCCTGGGTTGCaggtTTTGAAAGGAGACTTGCAGTCTGCTATTGAAACGCATGAAATGTTGTACACAGTCGCTAAAAAGTTCAAGTTTTTACCCGAGGCATTTACAACAGATTTCAACGTACATTGGGCACAACATCCTTTACGGCCAGAGTTTGTTGAAAGCACTTATTTCCTCTATGAGGCCACCAAGGATCCGCACTACTTAAATGTTGGGAAACATGTTATCGAATCACTAGAAAATTATGCAAGAGTTGCATGTGGATTCGCTGCTTTGAAAGACCTAAGAACATTGTCGCACGAAGATAAAATGGATTCATTCGTGCTGGCGGAAACGTTCAAATACTTGTATCTATTATTTTCGGAGGAATCAGAGCGTGAAATAAATATTCACGATTATGTTTTCACAACCGAAGCACATCTACTACCATTATATTTATCAACTGTTCCCAGTGACAAGACGGACAATGACACAACAGAAAACGAGAAtCCTGTCAATGAGCTTCGTGGTTTTTCTCTACGTCTTGATGAAGATTTACCTTCTTGTCCAAACCATCGTCATGGAATAAACGATATGTTATCGTTTGCACGGAAAGTTAGGAAGAATGTAAAAAACTCTATCCCGTCACATCAAACGCAACCCATATGTTCTAATCAACCGCCCGTTGTATCAGCTAAAATTGTGAATgaaaaagattcagaaaaaatacTTTCAGTCATCAAAATTGCAAGTAACCGTGAACGTAAGTTGAAAGCAGACCAATTCATTATGGACAACCAGGAGCActtgaaaatactgaaagattTTGGGATATCAATTCATAAAGGGGATGATGGGAAAGTGCAGTTAATGCACCAGGCTGCTAATGCTGCCACAGGAGCAGATGCGGAAGAAGGGTTATTGTTCATGAAAGAAATGATAGAATTATCCAAACAGAAAGGAACAATTGCGgTTGAGACAAATCCACGAGTTGTACAACTGATGTCTCCACCATACAAAGGAAGTATAGTGCTTACTGCTGGCTCAGCACAATTTGGAGCAGATCTTACAAACAATAAAGAAGGGTTATTAGCAGAAGTTGTTGAAGGTGACCCATTCCGTGCATGTGGAACcattaaaaatggagaagaaataaaaaatcgtaTCGTGCTGATTGAAAGAGGCGAATGCATGTTCATCGACAAGGTTCGTCTAGCGCAAGGAGTAGGGGCGTTGGGTGTAATTATAATAGATCATACTGAAGGCACATCCATTGAAACATCCCAGCAATTTTCTATGAGTGGTGACAGTAATCCTGAGGATGTACATATCCCTAGTGTGTTTCTCTTTAAGAAGGAGGGGGATTTACTACGCCAGTTTATGAAATCTGTTGAAGGGAAAATGCAAGTGAGAATAGCGGCCAAAGCAGTGCGTGAAAAAGAAGACGAGAAACAGGAGTCAACCGAGCAAGGAAAGACTGATACCGATGATAATGCAAGTACTTTAAAGGAAACATTAACcagtaaattattgaaaaatcaggACAAATTCGACAAGGCAGATAAGCAATTGGTACACATTAACGAGGATGGGAGTAAGaGTATTACCACGATATCTTCATTCATTGGCCCAAATGATAACAacgtaatgaaaaaatatattcagaaaaaaattgaaacgtgTCCAACTTCTGAGTGTAACCATGGAGTacaaacaaaatatgaatttagTACGGAGGATGCAGTTACAGAAACGACGGCAGATAcagaatcaaaagatattgctAAACCTAAAACTGATCAATCAAACGatgaaaattatatagaaaattttttttctaaagcattAAATGCAAAAGCTAACAAAGATGGTTCAATATGCACATCTGCTGGGTGTTTTGAAAGCTCAGAAGAGCATGATAAAATGAATTCCCTAGCAGATGGAATATTAGATAGTTTAAAACAACTGCAGAATAAACTGGAATCCAGTGTTGTAAACTTGCTTGATGAAATACGTGATAAACATAAAGATATAAATCATCCAAAAGCAAAACAAGAGTTTGAGAAAATTCGCCAGTTTCTAAATAATGAACAAGCAGCACAAGTGTTGCATGGTGGAGATACTGAGCAGCAAAATAGAATCCAGAATgcgaaagaaaatttaaaagaaccaactattgttattgagaaaaacaaagaaaatgaaaaaaaagcatataAAGATGAATATAAAGCTGCGCCAAATGCGGATGATACTTTAGCTAGCGAAAAGCAATTAACTATTACAGAAGACACAAATAGTGGAACAGAAACTATAAAAGGAAATGTTTCTGATAATGAAGCTGAACTAAATAAcgtaaaaaattcaacaaataaagaaaagtcAAATAGTAAACAAGACTCGGATATAGAAGATGATGTAGATCCAAACACGAGGACGAGAGAGGACTTATAGTCAGTAAGATTGGTATATGAGTTGACAAATTCATTTTGTTATGTTTGAGTGCTtattgcccagccggcatttacatgttcaaagttagcaataaaaagactagaacaaggtgtgaaatatgctcaaaattaacaataaagactcc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GQB9	ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis OX=8355 GN=edem3 PE=2 SV=2
Q2HXL6	ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Mus musculus OX=10090 GN=Edem3 PE=1 SV=2
Q9BZQ6	ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Homo sapiens OX=9606 GN=EDEM3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005235 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02225 all species →	PA	PA domain	Family	Interproscan
PF01532 all species →	Glyco_hydro_47	Glycosyl hydrolase family 47	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046450 all species →	Homologous_superfamily	PA domain superfamily	Interproscan
IPR001382 all species →	Family	Glycoside hydrolase family 47	Interproscan
IPR044674 all species →	Family	ER degradation-enhancing alpha-mannosidase-like protein 1/2/3	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR003137 all species →	Domain	PA domain	Interproscan
IPR036026 all species →	Homologous_superfamily	Seven-hairpin glycosidases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45679 all species →	ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004571 all species →	Molecular Function	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004559 all species →	Molecular Function	alpha-mannosidase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:1904380 all species →	Biological Process	endoplasmic reticulum mannose trimming	Interproscan
GO:1904382 all species →	Biological Process	mannose trimming involved in glycoprotein ERAD pathway	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000016644.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.